| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4944 |
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| Symbol | |
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| ID | 5356083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5098478 |
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| End bp | 5101534 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640813990 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_001350280 |
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| Protein GI | 152986594 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.978867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTA CCGATCCGTT CATTCGTCGC CCGGTCCTCG CCTGCGTGGT CAGCCTGCTG
ATCGTCCTGC TCGGCATGCA GGCCTTCAGC AAGCTGGTGA TCCGCGAATA TCCGCAGATG
GAGAACGCGC TGATCACGGT GACCACGCTC TACGCCGGAG CCAACGCGGA GACCATCCAG
GGCTACATCA CCCAGCCGCT GCAGCAGAGC CTGGCCAGCG CCGAAGGCAT CGACTACATG
ACCTCGGTGA GCCGGCAGAA CTACTCGACC ATCTCGATCT ACGCGCGGAT CGGCGCCAAC
ACCGATCGCC TGGTCACCGA GCTGCTGGCC AAGTCCAACG AGGTGAAGAG CCAGCTGCCG
CCGGACGCCG AGGACCCGGT GCTGCAGAAG GAGGCCGCCG ACGCCTCGGC GCTGATGTAC
ATCAGCTTCT ACAGCGAGCA GATGAACAAC CCGCAGATCA CCGACTACCT GTCGCGGGTG
ATCCAGCCCA AGCTGGCGAC CCTGCCCGGC ATCGCCGAGG CGGAGATCCT CGGCAACCAG
GTATTCGCCA TGCGCCTGTG GCTGGACCCG GTGAAGATGG CCGCGTTCGG CGTCACCGCC
GGCGAGATCA ACCAGGCGGT GCGGCAGTAC AACTTCCTCG CCGCCGCCGG CGAAGTGAAG
GGCCAGTTGG TGGTCACCAG CGTCAACGCC TCCACCGACC TCAAGTCGCC GCAGGCCTTC
GCCGCCATCC CGGTGAAGAC CGACGGCGAC CGCCGGGTGC TGATGGGCGA CGTCGCGCGG
GTCGAGCTGG GCGCCGCCAG CTACGATGCG ATCAGTTCGT TCAACGGCAT CCCGTCGGTC
TACATCGGCA TCAAGGGTAC GCCCAGCGCC AACCCGCTGG ACGTGATCAA GGAAGTGCGG
GCGAAGATGC CCGAACTGGA AGAGCAATTG CCGCCGAACC TCAAGGTGTC CATCGCCTAC
GATGCCACGC GCTTCATCCA GGCCTCCATC GACGAGGTGG TGAAGACCCT CGGCGAGGCG
GTGCTGATCG TCATCGTGGT GGTGTTCCTG TTCCTCGGCG CGTTCCGCTC GGTGCTGATC
CCGGTGGTGA CCATCCCGCT GTCGATGATC GGCGTGCTGT TCTTCATGCA GGCCATGGGC
TACTCGATCA ACCTGCTGAC CCTGCTGGCG ATGGTCCTGG CCATCGGCCT GGTGGTGGAC
GACGCGATCG TGGTGGTGGA GAACATCCAT CGCCACATCG AGGAGGGCAA GACGCCTTTC
GACGCCGCGC TGGAGGGGGC GCGGGAGATC GCCATCCCGG TGGTCAGCAT GACCATCACC
CTGGCCGCGG TGTACGCGCC GATCGGCTTC CTCACCGGCC TCACCGGCGC CCTATTCAAG
GAGTTCGCCT TCACCCTGGC CGGCGCGGTG ATCATTTCCG GGATCGTCGC CCTGACCCTG
TCGCCGATGA TGTGCTCGCG CCTGTTGCGC CACGAGGAGA ATCCCTCGGG CCTGGCGCAT
CGCCTCGACC TGCTCTTCGA GGGCCTTAAA CGCCGCTACC AGCGCGCCCT CCACGGCACC
CTGGAGACCC GTCCGGTGGT GCTGGTATTC GCCGTGCTGG TGCTGGCGCT GATCCCGCTC
CTGCTGATGT TCACCAAGAA GGAACTGGCG CCGGAAGAGG ACCAGGGCAT CGTTTTCCTC
ATGACCAGCT CGCCGCAGAC CGCCAACCTC GACTACCTGA ACCGCTACAC CGCCGAGTTC
GAAGGCATCT TCCGCAGCTT CCCGGAGTAC TACTCGGCGT TCCAGATCAA CGGCTACAAC
GGCGTCCAGG CCGGCATCGG CGGCATGCTG CTCAAGCCCT GGGACGAGCG CGAGAAGAGC
CAGATGGAAC TGCTCCACGC GGTACAGGCC AGGCTCAACG AGATCCCCGG CGTGCAGATC
TTCGCCTTCA ACCTGCCGTC GCTGCCGGGC ACCGGCGAGG GCCTGCCGTT CCAGTTCGTG
CTCAATACCG CCAACGACTA CGAGTCGCTG CTGCAGGTGG CGCAACGGGT CAAGCAGCGC
GCCACGGAGT CCGGCAAGTT CGCCTTCCTC GACCTCGACC TGGCCTTCGA CAAGCCCGAA
CTGGTGGTCG ACATCGACCG CGAGAAGGCC GCGCAGATGG GCGTCTCCAT GCAGGACCTG
GGGGTGGCGC TGGCCAGCCT GCTCGGCGAG GGCGAGATCA ACCGCTTCAC CATCGACGGG
CGCAGCTACA AGGTGATCGC CCAGGTCGAA CGCCCCTACC GCGACAATCC CGGCTGGCTC
GGCAGCTACT ACGTGAAAAG CAGCGACGGC CAGCTGGTCG CACTCTCGAC TCTGATCGAG
ACCCGCGAAC GGGCGCGGCC GCGCCAGTTG AACCAGTTCC AGCAACTCAA CTCGGCGATC
ATCTCCGGCT TCCCCATCGT CAGCATGGGC GAGGCCATCG AGACCGTGCA GCAGATCGCC
CGCGAGGAGG CCCCGCGCGG CTTCGCCGTC GACTATGCCG GCGCCTCGCG GCAGTACGTG
CAGGAAGGCA ACGCGCTGCT GGTCACCTTC GGCCTGGCCC TGGCGATCAT CTTCCTGGTC
CTCGCCGCGC AGTTCGAAAG CTTCCGCGAC CCGCTGGTGA TCATGGTCAC CGTGCCGCTG
TCGATCTGCG GCGCGCTGGT GCCGCTGTTC CTGGGCGTGT CGAGCCTGAA CATCTATACC
CAGGTCGGCC TGGTGACGCT GATCGGGCTG ATCAGCAAGC ACGGCATCCT GATCGTCGAG
TTCGCCAACC AGCTACGCCA CGAACAGGGC CTGGGGCGCC GCGAGGCCAT CGAACAGGCG
GCGGCGATCC GCCTGCGGCC GGTACTGATG ACCACCGCGG CGATGGTGCT CGGTGTGATC
CCGCTGATCC TCGCCAGCGG CGCCGGCGCG GTCAGTCGCT TCGACATCGG CATCGTGATC
GCCACCGGGA TGTCGGTGGG CACCCTCTTC ACCCTGTTCG TGCTGCCGTG CATCTATACC
CTGGTGGCGC GGCCGGATGC TCCACCCGGC GTGACGCAGG CGGCAGGCGC GCACTGA
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| Protein sequence | MAFTDPFIRR PVLACVVSLL IVLLGMQAFS KLVIREYPQM ENALITVTTL YAGANAETIQ
GYITQPLQQS LASAEGIDYM TSVSRQNYST ISIYARIGAN TDRLVTELLA KSNEVKSQLP
PDAEDPVLQK EAADASALMY ISFYSEQMNN PQITDYLSRV IQPKLATLPG IAEAEILGNQ
VFAMRLWLDP VKMAAFGVTA GEINQAVRQY NFLAAAGEVK GQLVVTSVNA STDLKSPQAF
AAIPVKTDGD RRVLMGDVAR VELGAASYDA ISSFNGIPSV YIGIKGTPSA NPLDVIKEVR
AKMPELEEQL PPNLKVSIAY DATRFIQASI DEVVKTLGEA VLIVIVVVFL FLGAFRSVLI
PVVTIPLSMI GVLFFMQAMG YSINLLTLLA MVLAIGLVVD DAIVVVENIH RHIEEGKTPF
DAALEGAREI AIPVVSMTIT LAAVYAPIGF LTGLTGALFK EFAFTLAGAV IISGIVALTL
SPMMCSRLLR HEENPSGLAH RLDLLFEGLK RRYQRALHGT LETRPVVLVF AVLVLALIPL
LLMFTKKELA PEEDQGIVFL MTSSPQTANL DYLNRYTAEF EGIFRSFPEY YSAFQINGYN
GVQAGIGGML LKPWDEREKS QMELLHAVQA RLNEIPGVQI FAFNLPSLPG TGEGLPFQFV
LNTANDYESL LQVAQRVKQR ATESGKFAFL DLDLAFDKPE LVVDIDREKA AQMGVSMQDL
GVALASLLGE GEINRFTIDG RSYKVIAQVE RPYRDNPGWL GSYYVKSSDG QLVALSTLIE
TRERARPRQL NQFQQLNSAI ISGFPIVSMG EAIETVQQIA REEAPRGFAV DYAGASRQYV
QEGNALLVTF GLALAIIFLV LAAQFESFRD PLVIMVTVPL SICGALVPLF LGVSSLNIYT
QVGLVTLIGL ISKHGILIVE FANQLRHEQG LGRREAIEQA AAIRLRPVLM TTAAMVLGVI
PLILASGAGA VSRFDIGIVI ATGMSVGTLF TLFVLPCIYT LVARPDAPPG VTQAAGAH
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