Gene PSPA7_4936 details

Gene Information

• Locus tag: PSPA7_4936
• ID: 5355593
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 5088089
• End bp: 5088691
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640813982
• Product: putative transporter
• Protein accession: YP_001350272
• Protein GI: 152986368
• COG category: [R] General function prediction only
• COG ID: [COG1279] Lysine efflux permease
• TIGRFAM ID: [TIGR00948] L-lysine exporter

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.79735
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGCAGA GCTATTTCAA CGGGATCCTG GTGGCCGCCG GCCTGATCAT CGCCATCGGC 
GCGCAGAATG CCTTCGTCCT CGCCCAGAGC CTGCGCCGCG AGCATCACCT CGCGGTAGCC 
GCTCTCTGCG TGCTCTGCGA CGCGATACTG GTCAGCCTCG GCGTGTTCGG CCTGGCCAGG 
CTGCTGGTGG AGAACCCGAC ACTACTGGCC ATCGCCCGCT GGGGCGGGGT GGCCTTCCTG 
AGCTGGTACG GGCTCAAGGC GCTGCTTCGC GCGCTGCGCC CGGACGCCCT CGGCGACGCC 
GCGGAAACCG GCCCTCGCTC GCGCCGGGCG GTGCTGCTGG CGGCGCTGGC GGTGACCCTG 
CTCAACCCGC ACGTCTATCT GGATACCGTC CTGCTGATCG GTTCGCTCGG CGCCCAGCAG 
GCCGCTCCCG GCGCCTACGC CCTTGGCGCG GCCAGCGCCT CGCTGATGTG GTTCTTCGCC 
CTCGCCCTCG GCGCTGCGTG GCTGGCGCCC TGGCTCGCGC GCCCGGCCAC CTGGCGCCTG 
CTCGACCTGA TGGTCGCCGC CATGATGCTG GGCATGGCCG TCCAACTGGT CCTCCGCAAC 
TGA 

 

Protein sequence

MWQSYFNGIL VAAGLIIAIG AQNAFVLAQS LRREHHLAVA ALCVLCDAIL VSLGVFGLAR 
LLVENPTLLA IARWGGVAFL SWYGLKALLR ALRPDALGDA AETGPRSRRA VLLAALAVTL 
LNPHVYLDTV LLIGSLGAQQ AAPGAYALGA ASASLMWFFA LALGAAWLAP WLARPATWRL 
LDLMVAAMML GMAVQLVLRN