| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4914 |
|---|
| Symbol | |
|---|
| ID | 5356169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5068901 |
|---|
| End bp | 5070118 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640813960 |
|---|
| Product | putative hydrolase |
|---|
| Protein accession | YP_001350250 |
|---|
| Protein GI | 152984655 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGAC ATCGACACAT CGTGGCCTGG CTCGAGGAGG TCGGCGACGA TCTGCGCAGC
CTGCGCCAGG ACATCCACGC CCATCCCGAA CTGGGTTTCG AGGAGCGGCG CACCGCCGCG
CTGGTCGCCG ACCGCCTGCG CGAGTGGGGC TACGAGGTAC ACGAAGGGAT CGGCCGCACC
GGCGTGGTCG GGGTCCTGCG CCAGGGCGAC AGTCCGCGCC GGATCGGGCT GCGGGCGGAC
ATGGACGCGC TGCCCATCGT CGAGGCCACC GGGCTCGGCT ACAGCAGTTG CCACGGCGGG
CGGATGCATG CCTGCGGCCA CGACGGGCAC ACCGCGATGC TGCTTGGCGC GGCGCGCTAC
CTGGCGGCGA CCCGGCGTTT CGACGGCACC CTGGTGCTGA TCTTCCAGCC CGCCGAGGAA
GGCCAGGGCG GTGCCGAGGC GATGCTCGCC GATGGTCTGC TGGAGCGCTT CCCCTGCGAC
GCGCTGTTCG GCATGCACAA CATGCCGGGG CTGGAGGCCG GCCACCTGGG CTTCCGCGCC
GGGCCGATGA TGGCGTCCCA GGATCTGCTG ACGGTCACCG TCGAAGGCGT CGGCGGCCAC
GGCTCGATGC CGCACCTGAG CGTCGACCCG CTGCTCGCCG CGTCCGGCGT GGTGATGGCC
TTGCAGAGCG TGGTGGCGCG CAACATCGAC CCGCAGAAGG CCGCGGTGGT CACCGTCGGC
GCGCTGCAGG CCGGCGAAGC GGCCAACGTG ATTCCCCAGC GCGCCTTGCT GCGCCTGAGC
CTACGGGCGC TCGACGGGCA GGTGCGCGAG CAGGTCCTGC AACGGGTCCG CGCGATCATC
GAGCAGCAGG CCGCCAGCTA CGGCTGCCAG GCCAGCATCG AGCACTATCC GGCCTACCCG
GTGCTGGTCA ACAGCGCCGA GGAAACCGAG TTCGCCCGCC AGGTCGGGGT CGAGCTGCTC
GGCGCGGACC AGGTCGACGG CGCTACGCCG AAGCTGATGG GCAGCGAGGA TTTCGCCTGG
ATGCTGCAAC GCTGCCCCGG CAGCTACCTG TTCATCGGTA ATGGCGCCGG GGGACCGATG
GTGCATAACC CGGGCTATGA CTTCAACGAC GACATCCTGG TCCTGGGCGC CGCCTACTGG
GGCGCGCTCG CCGAGACCTG GCTGGACGCT TCCGCGGCCG CCGGCGTCGG CACCGCCGCC
AGCCTCGGTG CGGCCTGA
|
|---|
| Protein sequence | MARHRHIVAW LEEVGDDLRS LRQDIHAHPE LGFEERRTAA LVADRLREWG YEVHEGIGRT
GVVGVLRQGD SPRRIGLRAD MDALPIVEAT GLGYSSCHGG RMHACGHDGH TAMLLGAARY
LAATRRFDGT LVLIFQPAEE GQGGAEAMLA DGLLERFPCD ALFGMHNMPG LEAGHLGFRA
GPMMASQDLL TVTVEGVGGH GSMPHLSVDP LLAASGVVMA LQSVVARNID PQKAAVVTVG
ALQAGEAANV IPQRALLRLS LRALDGQVRE QVLQRVRAII EQQAASYGCQ ASIEHYPAYP
VLVNSAEETE FARQVGVELL GADQVDGATP KLMGSEDFAW MLQRCPGSYL FIGNGAGGPM
VHNPGYDFND DILVLGAAYW GALAETWLDA SAAAGVGTAA SLGAA
|
|---|
| |