Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4901 |
Symbol | |
ID | 5355903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5054548 |
End bp | 5055675 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640813947 |
Product | hypothetical protein |
Protein accession | YP_001350237 |
Protein GI | 152987228 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.296494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACAG ACAAGCCTCC TCTGAAGCAG CGCGCCCTGC AAAAGCTCTT GCTCCGCCGG TTCGGCATGG CCGCCGGCAC CTACCTGTTC GGCCTGGTCC TGCTCTGGCT GGCGGTGCTC AGCGGTTTCT ACCGGGCCGC GCCGACCACC GCGGCGCTCA GCACCACCCT GGTGGTGGCT TGCCAACTGG CGTTCCTCTG GCTGTTCGCC AGTGGCCGCA ACCTGCGTTA CGCCGACCCC AGCCTGACCG AGCCGCAGGT GCTGGTGGCG ATCGTCTGGC TGACCTACTT CCTTTATCAC GTCGACAGCC TGCGCGGCAC TTTCATGGTG TTCTACGTGC TGGCCCTGTT GTTCGGCGTA TTCCAGTTGC CGCCACGGGT GTTCGCCCGC TGCGCGGCGC TGGCATTCAT CGCCTTCTCC GGCATCCATC TGGTGGAAGT CCTGCAGCGG CGCCTCGAAC TGCCGGGGCG CGCCGCCCTG CAGGTGCTGG CGCTGTTCAT CGTGCTGGTC TGGCTGAGTC TGTTCGCCAG CTACGTGCAG GCGATGCGCC AGCGCATGCG CCAGCGCCGC TATGCCCTGC AGGCGCACCA GGACACCCTG CGCGGGATGA TGCGTCAACT GGAAGACCTG GTCGCCACCG ACGAACTCAC CGGACTGTTC AACCGCCGGC ACTTCATGCG CATGGCCGGG CGCGCACTGG AAGACCTGCT GCCGAACCGG CAGCACGGCC TGGCGCTGAT CGACCTCGAT CACTTCAAGC GGATCAACGA CCGCCACGGC CATGCCGCCG GCGACCGTGT GCTGCAGACC TTCGCCGCGG TGGCGCGTTC CTGCCTGCGC GACGGTGACA TCCTGGCCCG CTACGGTGGC GAGGAATTCG TCCTGCTGCT GCCGCACGCC GATGCCGAGC AGCTGGAACG TTGTTGCGAG CGCCTGCGCC TGGCATTCGA ACAGGCGGAA CCGGTGGGCG TGGCGGTGGA GGTCCTGAGC CTGTCGGTGG GCATGACCCT GCTGTATGCC GACGACGATC TCGACGAGGC CTTGCAGCGG GCCGACCAGG CGCTCTACCG TGCCAAGCGC GGCGGACGAA ACCGCTGCGA CGCCACCTGG GAGGTCACCA GTGCCTGA
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Protein sequence | MRTDKPPLKQ RALQKLLLRR FGMAAGTYLF GLVLLWLAVL SGFYRAAPTT AALSTTLVVA CQLAFLWLFA SGRNLRYADP SLTEPQVLVA IVWLTYFLYH VDSLRGTFMV FYVLALLFGV FQLPPRVFAR CAALAFIAFS GIHLVEVLQR RLELPGRAAL QVLALFIVLV WLSLFASYVQ AMRQRMRQRR YALQAHQDTL RGMMRQLEDL VATDELTGLF NRRHFMRMAG RALEDLLPNR QHGLALIDLD HFKRINDRHG HAAGDRVLQT FAAVARSCLR DGDILARYGG EEFVLLLPHA DAEQLERCCE RLRLAFEQAE PVGVAVEVLS LSVGMTLLYA DDDLDEALQR ADQALYRAKR GGRNRCDATW EVTSA
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