| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4872 |
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| Symbol | cpaB |
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| ID | 5357766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5023959 |
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| End bp | 5024870 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640813918 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001350208 |
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| Protein GI | 152989266 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0982615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGCA AGGTGCTGAT GGTGCTGGCC GGGCTGCTGC TGGTCGGTGC CGTACTGCTT
GGATACCTCG GCGTGTCCAT CGGGCGTGCG CCTTCGACCG TCCAGGTCCC TGCGGTGGCG
CCGGCGACTT CGGTGGTGGA CGCGTCGCTG GAGAAACTCG AACGCAAGCC GGTGCTGGTG
GCCAGCCGTG ACCTGCCGGC GCTGGCGGTG ATCGGCAAGG ACGACCTCGT CGTGGAAATG
CTGCGCACCG CGCCGGCCGG CAGCTACGAC AAGCCCGAGG CGCTGCTCGG CAAGCGGGTC
TGGGTGGCGG TGCCGGCGGG CAGCATCCTC TCCGCGGCGA CGCTCGAGCC CGGCGGCCCG
CTGGCCCGCA CCATCCGTGC GGACGAGCGC GCCATGGCGA TCGCGGTGGA CGAGGTGATC
GGCGGCGGCG GCTTCGTCCT GCCCGGCGAC TACGTCGACG TGATGCTCTT CGTCCGCGAC
GAGCGCGGTG GCGAGTCGAC GTCGCTGGCG CAGTTGGTGT TGCCCGGCGT GCGGGTGCTC
ACCTACGGCG AACGGATCGC CGTGGGCGGC GACGGCCAGG ACCGTTCGGC CACGGAAAAG
GATCCGCGCC CGCCGCGTAC CGCCGTGCTG GCGGTGCCGG CGGAAGGCGT GGCGCGGCTG
ATGCTGGCGA GCCAGGCCGG GGCGTTGCGC CTGGCGATCC GCAGCCAGGA CGAGGAACTC
TACCGCAGGG AACAGGAAGG CCCGCTGCTG CGGGCCTCGC TGGGCGCTCC AGGCGCGGCG
CTGACCCTCG ACCAGTTGCT CGAGCGGCGC AAGGCCACGC CGGCCGGCGT ACGCAGCGCA
GCGCCGCGCG CGCCGGCCGG CGCCGGGGTG GCGGTCTACC GTGGCAGTGC CATGACCCAC
GAAGCGCCTT GA
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| Protein sequence | MNSKVLMVLA GLLLVGAVLL GYLGVSIGRA PSTVQVPAVA PATSVVDASL EKLERKPVLV
ASRDLPALAV IGKDDLVVEM LRTAPAGSYD KPEALLGKRV WVAVPAGSIL SAATLEPGGP
LARTIRADER AMAIAVDEVI GGGGFVLPGD YVDVMLFVRD ERGGESTSLA QLVLPGVRVL
TYGERIAVGG DGQDRSATEK DPRPPRTAVL AVPAEGVARL MLASQAGALR LAIRSQDEEL
YRREQEGPLL RASLGAPGAA LTLDQLLERR KATPAGVRSA APRAPAGAGV AVYRGSAMTH
EAP
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