Gene PSPA7_4869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_4869 
Symbol 
ID5356450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp5020237 
End bp5021502 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content66% 
IMG OID640813915 
Productputative type II secretion system protein 
Protein accessionYP_001350205 
Protein GI152983611 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.192053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCCTG CATTCGGCGC GCCGGCGGAC GGCGGCGGTT TCCACTATCG CCAGGAGCAG 
GATATCCAGG CGCTGAAGCT GCGCCTGCAC CGCTACATCA TCGACGAGAT CGACGAAGAT
GGCATGAACC TGCTGGAAGG CGCTCGCGGC GCGGTGGTCC AGTACGTTTC GGAAAAGGTC
TGCGAATACG GCTCGCGCCA CCAACTGGCG ATCTCCCGCT ATGAACTGGA TCGTCTGGCC
GAGGAACTGG TCGACGAACT CACCGGTTTC GGCCCGCTGG AAATCCTGTT GCGCGACCCC
GGCGTCTCGG AAATCCTGGT CAACGGACCG GGGCGGGTGT TCATCGAGCG GGAAGGGCGG
CTCTACCAGA GCGACCTGCG TTTCATCGAC GATCATCATG TGCTGCGCGT GATCCAGCGC
ATCCTCGCGC CGCTCGGGCG GCGCCTGGAC GAGTCCAGCC CGATGGTCGA CGCGCGCCTG
CCGGACGGCA GCCGGGTCAA TGCGATCATC CCGCCGGTGG CGCTGGACGG ACCGTGCATC
TCGATCCGCA AGTTCAGCCA GGAACTGCTG CGCAGCGCCG ACCTGCTGGC CTACCAGAGC
GTCGACGAGG CCTTGCTGGA GTTCCTCCGC CAGGCCGTCT CGCGGCGTTG CAACATCCTC
ATCAGCGGCG GCACCGGTAC CGGCAAGACC ACCCTGCTCA ACGTCATCAG CGGTTTCATC
GACCCGCGCG AACGGATCGT CACCATCGAG GACACTGCCG AACTGCAACT CGGTCACGAC
CATGTGGTGC GCCTGGAAAC CCGTCCGCCG AACGCCGAGG GCTATGGCGA GGTGACCGCC
CGCGACCTGA TCCGCAATGC CCTGCGGATG CGCCCGGACC GGATCATCCT CGGCGAGATC
CGCGGGGTCG AGGTGCTCGA CGTGCTGCAG GCGATGAATA CCGGCCACGA TGGCTCGATG
AGCACGGTGC ACGCCAACTC GGCGATGGAC TCGCTGCTGC GCATGGAGAT GCTGGTCGGC
CTCACCGGCA ACAGGTTGCC GGAGCAGACC CTGCGCCTGA TGATCTGCGC CGCGCTCGAC
GTGGTGGTAC AGATCACCCG CCTGGCCAGC GGTCGGCGTT GCATCAGCGA AGTGCTGGAG
GTGCTGGAGG TGCGCGACGG CATATACGTC ACCAATACCC TGTTCAGCCT CGACCGGCGT
GGCAGCGGCC AGTTCGTCCG CCAGGCCGCG CCGGTCGGCC AGAAGTTCCG CCAGGAGCTG
TTGTGA
 
Protein sequence
MRPAFGAPAD GGGFHYRQEQ DIQALKLRLH RYIIDEIDED GMNLLEGARG AVVQYVSEKV 
CEYGSRHQLA ISRYELDRLA EELVDELTGF GPLEILLRDP GVSEILVNGP GRVFIEREGR
LYQSDLRFID DHHVLRVIQR ILAPLGRRLD ESSPMVDARL PDGSRVNAII PPVALDGPCI
SIRKFSQELL RSADLLAYQS VDEALLEFLR QAVSRRCNIL ISGGTGTGKT TLLNVISGFI
DPRERIVTIE DTAELQLGHD HVVRLETRPP NAEGYGEVTA RDLIRNALRM RPDRIILGEI
RGVEVLDVLQ AMNTGHDGSM STVHANSAMD SLLRMEMLVG LTGNRLPEQT LRLMICAALD
VVVQITRLAS GRRCISEVLE VLEVRDGIYV TNTLFSLDRR GSGQFVRQAA PVGQKFRQEL
L