Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4852 |
Symbol | recC |
ID | 5359351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4999520 |
End bp | 5002990 |
Gene Length | 3471 bp |
Protein Length | 1156 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640813898 |
Product | exodeoxyribonuclease V gamma chain |
Protein accession | YP_001350188 |
Protein GI | 152984109 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGTCC ATGGCAACCG CCTGGACGAC CTGCGCGACC TCGCGGTCTC CTGGATGCGC CGCTATCCGC TGGCGCCGCT GGAGAGCGAG CGGATCCTGG TGCACAGCAA CGGTATCGCC CAGTGGCTGA AGCTGGCGCT GGCCGAGGAT CCGCGCGCGG ACGGCGGCGG CGGTGGCATC GCCGCGGCGC TGGAGGTGCA GCTGCCGGCG CAGTTCCTCT GGCAGGCCTA CCGCGCGGTG CTCGGTCGCG AGAGCATTCC CGAGGTTTCC GAGCTGGACA AGGCGCCGCT GACCTGGCGT CTGATGCGCC TGCTCCCGGG GCTGCTGGAG CGTCCCGAGT TCCATGCCCT GCAACGCTTC CTCGCCGATG ACGCCGACCT GCGCAAGCGC CACCAACTGG CCGAGCGCCT GGCCGACCTG TTTGACCAGT ACCAGGTCTA CCGCGGCGAC TGGCTCGACG ACTGGAGCCA GGGGCGCGAC CAGTTGCGCA CGGCGAACGG CAAGGCGCGT CCGCTCGACG CCAGCGAACG CTGGCAGGCC GAACTGTGGC GCGCGCTGCT CGCCGACGTC GGCGCCGACA GCCTGGCCCG CAGCCGTTCC GGCGTGCACC GACGTTTCAT CGAGGCCTTG CGTTCGGCCG AGGTCGCACC GCGCGCATTG CCGCGGCGGG TAGTGGTGTT CGGCATCTCC TCGATGCCGG CGCAGACCCT CGAGGCGCTG GCCGCCCTGG CCAGGTTCAG CCAGGTGCTG CTCTGCGTGC ACAACCCCTG CCGCCACCAC TGGGCCGACA TCGTCGCCGA CAAGGACCTG CTGCGCCACG AGTACCGCCG CCAGCAGCGC CGCGCCGGCA CCCCGGCCGG CCTCGACGAG GACCTCCAGC ACCAGCACGC CCAGCCGCTG CTGGCGGCCT GGGGCAAGCA GGGCCGCGAC TACATCAACC TGCTCGACAG CTACGACGAC CCGGACAGCT ATCGCACGCT GTTCGGCGAG GTCAACGGCG GGCGCATCGA CCTGTTCAGC GAGGAGCCGC CGGCCAGTCT GCTCGGCCAG TTGCAGGACG ACATCCTCGA ACTGCGCCCG CTGGCGGAGA CCCGTCGGCA CTGGCCGCCG GTGAGCCCGC AGCACGATGC CTCGATCCGC TTCCAGGTAG CGCACAGCGC GCAGCGCGAG GTGGAGATCC TCCACGACCA ATTGCTCGCC CGCTTCAACG CCGATCCGCG CTTGAAGCCG CGCGACGTGA TCGTCATGGT CCCCGACATC AACGCCTACG CGCCGCACAT CGAAGCGGTG TTCGGCCAGG TGCCGCGCGA CGACCAGCGC TTCATTCCCT ACACCCTCGC CGACCAGGGC CAGCGCGGCC GCGAACCGCT GCTGATCGCC CTGGAGCACC TGCTGAAACT GCCCGAGAGC CGCTTCGCGG TAAGTGAAAT CCTCGACCTC CTGGACGTCC CGGCACTGCG CCGGCGTTTC GGCGTCGACG AGGCCGAGCT AGCGATCCTG CATCGCTGGA TCGAGGGTGC GGGGGTACGC TGGGGCCTGG ACGCCGCGCA GCGCGAGCGT CTCGGCCTGC CGCCGGGCCT GGAGGGCAAC AGCTGGCGCT TCGGCCTGCG GCGCATGCTG CTCGGCTATG CCGTCGGCGA GGGCGCGCCC CTGCAGGGGA TCCAGCCCTA TGACGAGGTC GGTGGTCTCG ACGCGGCCCT GGCCGGCCCG CTGGCGGTGC TGCTGGAGCG CCTCGAGGTG GCCTATGCCG AACTGGCCGA GCCGGCCACC CCGGTACAGT GGGGCGAGCG CCTGCAGGCC TTGCTCACGG TATTCTTCGA GGCCCACGAC GAGCGCGACG AACTGCTGCT TACCCAGCTC CTGCAACTGC TCGAGCGCTG GCAGGAACAC TGCGCCTGCG CGGCTTTCGC CGAACCGCTG CCGCTCAGCG TGGTACGCGA GGCCTGGCTC GGCAGTCTTG ACCAGGGCGG CCTGAACCAG CGCTTCCTGG CTGGCGCGGT GAGCTTCTGC ACGCTGATGC CGATGCGCGC GATCCCGTTC CGGCTGGTCT GCCTGCTGGG CATGAACGAC GGCGACTACC CGCGCCAGCA AGCGCCGCTG GACTTCGACC TGATGCGCAA CGACTACCGT CCCGGCGACC GCTCGCGGCG CGAGGACGAT CGCTACCTGC TGCTCGAGGC GCTGCTCTCG GCGCGCGAGC AGCTCTACGT GAGCTGGGTG GGGCGAAGCA TCCGCGACAA TGAAGAGCGG CCGCCCTCGG TGCTGATCGG CCAGTTGCGC GATCACCTGG CGGCCGGCTG GCGCCTGTCT CCGGACGCTG ACGGCGATGC GCTGCTGCGC GCCCTGACCC AGGAACATCC GCTGCAGCCG TTCAGCCGGC GCTATTTCCA GGCTGCGCCG GCGCAGGGCG TGGACGGTCT GTTTACCTAT GCCCGCGAGT GGCGCGAAGT CCATCGCGAG GACGAAGCCG CCGCTGCCGA GGCCGAGGCG CCGCTGCCCC CGCTGGTCCT GGAGGGCGCG CTGGGTTTGC GCCCGCTGGC GGAGTTCCTG GCCAACCCGG TGAACGCCTT CTTCCAGCAG CGGCTCAAGG TGCGTTTCGA CGACGAGCAA CTGACCGGCA ACGACGAAGA ACCCTTCGAA CTGGATGCCC TGGACAACTG GAAGCTGCAG TTCGAGCTGA CCGAGCGCCT GAAGCGCTGG GTGGAGCTGG ATTGGGACGC CGAGCGCCTG CCGGCGCAGT TGCAGGCGCA GGTCGAGCGC CTGCGCCGGC AGGGGCGCCT GCCGCTGGCG GCGTTCGGCG AGTTCTCCGC GCGCCATTTG CTGCAACCGC TGCCCGACCT GCTCTGGCGC TATCGCCAGG AAATCCAGCG CTGGCCGGAG GTGGTCGAGC AGCAGCAGGA ACTGCGCCAT CGCCATCCTT CCGGGCTGGA ACTGGAGGAC TGGCTCGGTG GACTGCGCCG CGACGCATCC GGACGCCTGG CGCGCCTGCA GTTGCTCAGC GGCAAGCTCC ACGAAGGGCG CGGCTACAAG TGGCATAGCC TGGTGCGCCA CTGGTTGCAG CACCTTGCCT TGCAGATGCT CGGCCAGCCG GTGCGCAGCG TGCTGGTGAG CCAGAGCGGA ACCCTGGAGA TTCCGCCGCT GCCGGCCGAG CGCGCCGGTG AACACCTCGA CCGGCTGCTC GACGCCTGGT GCGAAGGCAT GCGCCGGCCC CTGCCGGTGG CCTGCCGGAC AGCCTTCGCC TGGCTGGCCG GCGGTGGCGC CGGCGAGCCG GAGAAGGCCG CACGCGAGGC GCGCAAGCGC TACGAAGGCG GCTTCAACGT CGGCGGCGAA GTGGATGGCT CGCCGGCTCT GGCGCGGGTC TACCCGGACT TCGATCGGCT TCTCGCCGAT GGTGGCTTCG CCCATTGGGC CGAACTGCTC TACGCACCGT TGCTGACCAC CCTGGGCCGT GGCACGGAGG AACCGGCATG A
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Protein sequence | MIVHGNRLDD LRDLAVSWMR RYPLAPLESE RILVHSNGIA QWLKLALAED PRADGGGGGI AAALEVQLPA QFLWQAYRAV LGRESIPEVS ELDKAPLTWR LMRLLPGLLE RPEFHALQRF LADDADLRKR HQLAERLADL FDQYQVYRGD WLDDWSQGRD QLRTANGKAR PLDASERWQA ELWRALLADV GADSLARSRS GVHRRFIEAL RSAEVAPRAL PRRVVVFGIS SMPAQTLEAL AALARFSQVL LCVHNPCRHH WADIVADKDL LRHEYRRQQR RAGTPAGLDE DLQHQHAQPL LAAWGKQGRD YINLLDSYDD PDSYRTLFGE VNGGRIDLFS EEPPASLLGQ LQDDILELRP LAETRRHWPP VSPQHDASIR FQVAHSAQRE VEILHDQLLA RFNADPRLKP RDVIVMVPDI NAYAPHIEAV FGQVPRDDQR FIPYTLADQG QRGREPLLIA LEHLLKLPES RFAVSEILDL LDVPALRRRF GVDEAELAIL HRWIEGAGVR WGLDAAQRER LGLPPGLEGN SWRFGLRRML LGYAVGEGAP LQGIQPYDEV GGLDAALAGP LAVLLERLEV AYAELAEPAT PVQWGERLQA LLTVFFEAHD ERDELLLTQL LQLLERWQEH CACAAFAEPL PLSVVREAWL GSLDQGGLNQ RFLAGAVSFC TLMPMRAIPF RLVCLLGMND GDYPRQQAPL DFDLMRNDYR PGDRSRREDD RYLLLEALLS AREQLYVSWV GRSIRDNEER PPSVLIGQLR DHLAAGWRLS PDADGDALLR ALTQEHPLQP FSRRYFQAAP AQGVDGLFTY AREWREVHRE DEAAAAEAEA PLPPLVLEGA LGLRPLAEFL ANPVNAFFQQ RLKVRFDDEQ LTGNDEEPFE LDALDNWKLQ FELTERLKRW VELDWDAERL PAQLQAQVER LRRQGRLPLA AFGEFSARHL LQPLPDLLWR YRQEIQRWPE VVEQQQELRH RHPSGLELED WLGGLRRDAS GRLARLQLLS GKLHEGRGYK WHSLVRHWLQ HLALQMLGQP VRSVLVSQSG TLEIPPLPAE RAGEHLDRLL DAWCEGMRRP LPVACRTAFA WLAGGGAGEP EKAAREARKR YEGGFNVGGE VDGSPALARV YPDFDRLLAD GGFAHWAELL YAPLLTTLGR GTEEPA
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