| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4850 |
|---|
| Symbol | recD |
|---|
| ID | 5358356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4993630 |
|---|
| End bp | 4995792 |
|---|
| Gene Length | 2163 bp |
|---|
| Protein Length | 720 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640813896 |
|---|
| Product | exodeoxyribonuclease V alpha chain |
|---|
| Protein accession | YP_001350186 |
|---|
| Protein GI | 152986489 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.61173 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCGA CCCTCAAGCA ACTGGCCGGC GAAGTTCGCG ATACTGGCGA CCAGCGGCTG
ACGCAACCGC TGGCGGCGCG CCACGATCTG CTGCGCCAGC TCGACCTGTG GGTGGCGCGC
GGCTGGTTGC GCGCGCTGGA CCGCGCGCTC GTGGCCTTCC TCGTCGAACT GGAGCCGCAG
GCCGATCCCC GGGTGCTGCT GGCGGCGGCC CTGACTAGCC ACCAACTGGG CCATGGTCAC
GTCTGCCTGG ACCTGGACGC GACCCTCGGC GCCCCCGACG CGGCCCTGTC GCTGCCGCCG
GAAGGCGATG AAAGTGGTGA TGTCCTGCTG CCTTCGCAGC TGCTGCAGGG TATGCGCCTC
GACGCCTGGC GCCAGGCCCT GGCAGGTTCG CCGCTGGTGG AGGTGGTCGA CGGGCGTGCG
GACGATCCCG CAGCGAGCGA CCAGGAGGCC TCGCCGCTGG TGCTCTGCGA CCAGCGTCTC
TACCTGCGCC GCTACTGGCG GCATGAACTG GAAATCGCCG CGGCCCTGCG CGAGCGTCTG
GCGCGCCGGG CGCCCCTGGC CGAGGACCTG GCGCCACGCC TGGCCGCGCT GTTCGCGCAG
CCGCCGCGGG AAGACGGCCG GCGCGTCACC GACTGGCAGA AGCTGGCCTG CGCCCTGGCG
GCGCGCGGTT ACTTCAGTCT GATCACCGGC GGCCCTGGCA CCGGCAAGAC CACTACCGTG
GTACGCCTGC TCGGCCTGCT CCAGGCGCCG GCGGTGGCCG CCGGCCAGCC GCTGCGCATC
CGCCTCGCGG CACCCACCGG CAAGGCCGCG GCGCGCCTGT CCGAATCCAT CGGCCAGCAG
GTCCGCGCCC TGCCATTGCC GGAGGCGGTG CTGCAGGCGA TCCCCGCCGA GGTCACCACC
CTGCACCGGC TGCTCGGCAG CCGGCCGGAT ACCCGGCACT TCCGCCATCA CCGGGACAAC
CCGCTGGCGC TGGATGTGCT GGTGGTGGAC GAGGCCTCGA TGATCGACCT GGAGATGATG
GCCAGCCTGC TCGACGCGCT GCCGCCGCAG GCGCGCCTGA TCCTCCTTGG CGACAAGGAC
CAGTTGGCCT CGGTGGAGGC CGGCGCGGTG CTCGGCGATC TCTGCCGGGA CGCCGAGGAA
GGCTGGTATA GCGCCGAGAC CCGCGCCTGG TTGCAGCAGG TCAGCGGCGA AACCTGGCAG
GGGCTGCGCG AAGGTTCGGC GCAGGCGCAT CCGCTGGCGC AGCAAACGGT GATGCTGCGG
CATTCGCGGC GTTTCGGCGC CAGCAGCGGG ATCGGCCGCC TGGCGCGGCT GGTCAATCGG
CAACAGGCCG CGGATGCCCG CGCGCTGCTC GACCAGCCGC CCGCCGACCT GTTCGATCTG
CGCCTGCGCG GCGAGCGGGA CGTGGCTTTC GCCCGGTTGT TCGTCGACGG GCATCCGCGC
GCGGCTGGAA CCCCATACGG CTATCGGCAC TACCTGCAAC GCCTGGCCGA GGGCCGTCCG
CCTGCCGGGT TGGCGCTGGA GAGCGAGGCC TGGGAGCGCT GGGCGCAGTC GGTGCTGGCG
GCGTTCGATG CCTTCCGCCT GCTCTGCGCG CTGCGCCGCG GTCCCTGGGG CGTGGAGGGG
TTGAACCAGC GGGTGGCGGC GGAACTGCTG CGACTCGGCC TGATCGACGC CGACCACGGC
TGGTACGAGG GACGACCGGT GCTGGTGACG CGCAACGACT ACAGCCTGGG GCTGATGAAC
GGCGACATCG GCATCGCCCT GCGCCTGCCC GAGCGCGGCG CCGACGGTAG CCTGCGCTTC
GCCTTGCGGG TCGCCTTCCC GCGCAACGAT GGCAGCGGCG GGGTGCGTTT CGTCCTGCCG
AGCCGCCTGG TCGAGGTGGA CACCGTGTTC GCCATGACCG TGCACAAGTC GCAGGGCTCG
GAGTTCGCGC ATACCGCGCT GGTTCTGCCG GACGCGCTGA ACCCGGTGTT GACCAAGGAA
TTGGTGTATA CCGGCATCAC CCGCGCCCGC GACTGGTTCA GCCTGGTGGA AAGCCACCCC
GGGGTATTCG AGGAAGCGCT GCGGCGCAAG GTGCGCCGAC TCAGCGGGCT GATGCTGCAT
CTGCAGGCGG AAAGCCGGGA AGCGCCGCGC CAGCCTGGAG AACAGGGCGA GCTACCGTTC
TGA
|
|---|
| Protein sequence | MNPTLKQLAG EVRDTGDQRL TQPLAARHDL LRQLDLWVAR GWLRALDRAL VAFLVELEPQ
ADPRVLLAAA LTSHQLGHGH VCLDLDATLG APDAALSLPP EGDESGDVLL PSQLLQGMRL
DAWRQALAGS PLVEVVDGRA DDPAASDQEA SPLVLCDQRL YLRRYWRHEL EIAAALRERL
ARRAPLAEDL APRLAALFAQ PPREDGRRVT DWQKLACALA ARGYFSLITG GPGTGKTTTV
VRLLGLLQAP AVAAGQPLRI RLAAPTGKAA ARLSESIGQQ VRALPLPEAV LQAIPAEVTT
LHRLLGSRPD TRHFRHHRDN PLALDVLVVD EASMIDLEMM ASLLDALPPQ ARLILLGDKD
QLASVEAGAV LGDLCRDAEE GWYSAETRAW LQQVSGETWQ GLREGSAQAH PLAQQTVMLR
HSRRFGASSG IGRLARLVNR QQAADARALL DQPPADLFDL RLRGERDVAF ARLFVDGHPR
AAGTPYGYRH YLQRLAEGRP PAGLALESEA WERWAQSVLA AFDAFRLLCA LRRGPWGVEG
LNQRVAAELL RLGLIDADHG WYEGRPVLVT RNDYSLGLMN GDIGIALRLP ERGADGSLRF
ALRVAFPRND GSGGVRFVLP SRLVEVDTVF AMTVHKSQGS EFAHTALVLP DALNPVLTKE
LVYTGITRAR DWFSLVESHP GVFEEALRRK VRRLSGLMLH LQAESREAPR QPGEQGELPF
|
|---|
| |