Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4830 |
Symbol | gspI1 |
ID | 5358780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4971640 |
End bp | 4972008 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640813876 |
Product | HxcV putative pseudopilin |
Protein accession | YP_001350171 |
Protein GI | 152984970 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.95899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTCTT CTTCCCGCGG TTTCACCCTG ATCGAGGTGC TGGTGGCCCT GGCCATCGTC GCCATCGCCC TGGCCGCAGC GATCCGCGCG GTGGGCCTGA TGACCGATGG CAACGGCCTG CTGCGCGACA AGTCGCTGGC CCTGCTGGCG GCGCAAAGCC GTCTCGCCGA ACTGCGCCTG GATGGGGCCG TGCGTCCCGG CGAGAGCGAT TTCGAATGCT CCCAGGGGCG CCTGCGGCTG TACTGCGAGC AGCGCGTCCA GGCCACCGCC GACCCGGCCC TGCTGTGGGT GGAGATCCGC GTACGCGCGC AGCGCGAACA GGCCGTCCCG CTGGCACGCC TGAATACCCT GCTGAGCCGC GTGCCCTGA
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Protein sequence | MPSSSRGFTL IEVLVALAIV AIALAAAIRA VGLMTDGNGL LRDKSLALLA AQSRLAELRL DGAVRPGESD FECSQGRLRL YCEQRVQATA DPALLWVEIR VRAQREQAVP LARLNTLLSR VP
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