| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4824 |
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| Symbol | gspE1 |
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| ID | 5356081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4964410 |
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| End bp | 4965819 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640813870 |
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| Product | putative type II secretion system protein |
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| Protein accession | YP_001350165 |
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| Protein GI | 152986413 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0112939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTGC TGCCCTACGC CTGGGCCAAG GCGCAGCGCG CCCTGCTGCG GCCGGGCGCC
GACGGCGCGA CCCTGCTGGT CAGTCCGCGC ACGCCCGGCT GGGCGATCAG CGAGGTGCGC
CAGCGGCATG CCGTGGCCAG TCTCGAGAGC GTCCGCGATG ACGAACTCGA CACCCTGCTG
GCCAGCGCCT ATTCCGACAC CGGCAGCGCC GCGGCGGTGG TCGGCGCGGC GGAGAGCGAG
GTCGACCTCG ACCGCCTGCT GGACGACATC CCCGAGGTCA CCGACCTGCT CGACACCCAG
GACGGCGCGC CGGTGATCCG CATGATCAAC GCGCTGCTGA CCCAGGCCGC GCGCGACGAG
GCCAGCGACA TCCACATCGA GCCCTTCGAG ACCCATTCGG TGGTGCGCTA CCGCGTCGAC
GGCGCCCTGC GCGACGTGGT CGCGCCGCGC AAGGCGCTGC ACGCGGCGCT GGTATCGCGG
ATCAAGATCA TGGCGCAGCT GGACATCGCC GAGAAACGCC TGCCCCAGGA CGGCCGCATC
GCCCTGCGGG TGGCCGGGCG ACCGATCGAC ATCCGCGTCT CCACCGTACC CACCGGGCAC
GGCGAGCGGG TGGTGATGCG TCTGCTGGAC AAGCAGGCCG GGCGCCTGAA GCTGGAGACC
CTGGGCATGG CCCCGGGGGT GCTGGCGCCG CTGGACCAGC TGATCCGCCA GCCGCACGGC
ATCGTGCTGG TCACCGGGCC CACCGGCAGC GGCAAGACCA CCACCCTCTA CGCCGCCCTG
GCGCGGCTCG ACGCCAGCAC CAGCAACATC CTCACCGTCG AGGACCCGGT GGAGTACGAC
CTGCCCGGGA TCAGCCAGAT CCAGGTCAAC GCGCGCATCG ACATGACCTT CGCCGTGGCC
CTGCGGGCGA TCCTCCGGCA GGACCCGGAC ATCATCATGA TCGGCGAGAT CCGCGACCTG
GAGACCGCGC AGATCGCCGT GCAGGCCTCG CTCACCGGGC ACCTGGTGCT GGCCACGCTG
CACACCAACG ACGCGGTGTC GGCGGTGACC CGGCTGGTGG ACATGGGCGT CGAGCCATTC
CTGCTCGCCT CGTCGATGCT CGGCGTGCTC GCCCAGCGCC TGGTGCGGCG CCTGTGCACG
CACTGCCGGG TCGAAGAGGA CGGCGGTTGG CGCGCGGTCG GCTGCCCGGC CTGCAACCAC
ACCGGCTACA GCGGGCGCAC CGGCATCCAC GAGCTGTTCG TGATCGACGA CGAGATCCGT
CGCCTGGTCC ACCAGGGCCG CGCCGAGCAG GATCTCCGCG AAGCCGCCCG CGCCGCCGGC
ATGCGCAGCA TGCGCGAGGA CGGCGAGCGC TGGATCGCCA GCGGCGCCAC CACCCTGGAG
GAAATCCTCC GCGTGACCCG GGACGCCTGA
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| Protein sequence | MSLLPYAWAK AQRALLRPGA DGATLLVSPR TPGWAISEVR QRHAVASLES VRDDELDTLL
ASAYSDTGSA AAVVGAAESE VDLDRLLDDI PEVTDLLDTQ DGAPVIRMIN ALLTQAARDE
ASDIHIEPFE THSVVRYRVD GALRDVVAPR KALHAALVSR IKIMAQLDIA EKRLPQDGRI
ALRVAGRPID IRVSTVPTGH GERVVMRLLD KQAGRLKLET LGMAPGVLAP LDQLIRQPHG
IVLVTGPTGS GKTTTLYAAL ARLDASTSNI LTVEDPVEYD LPGISQIQVN ARIDMTFAVA
LRAILRQDPD IIMIGEIRDL ETAQIAVQAS LTGHLVLATL HTNDAVSAVT RLVDMGVEPF
LLASSMLGVL AQRLVRRLCT HCRVEEDGGW RAVGCPACNH TGYSGRTGIH ELFVIDDEIR
RLVHQGRAEQ DLREAARAAG MRSMREDGER WIASGATTLE EILRVTRDA
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