Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4765 |
Symbol | |
ID | 5358233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4897794 |
End bp | 4899077 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640813811 |
Product | porin |
Protein accession | YP_001350107 |
Protein GI | 152987133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0925937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGACTT CCCTGCCGCA GGCCGCAAGG TCTGTACGTT CGTCCCGCAG CACCACCCTG ACCACCACCG CCGTCGTGCT CGCCAGCATC GCGCCCCTGG GCAACGCCGC CGGCTTCCTC GAAGACAGCA AGGCCAGCCT GGAAACCCGC AACTTCTACA TGAACCGCGA CTTCCGCGAC GGCCCCGGCC AGTCCAAGCG CGAGGAGTGG GCGCAAGGCT TCATCCTCAA CCTGCAGTCC GGCTACACCC AGGGCACCGT CGGCTTCGGC CTCGACGCCA TGGGCATGCT CGGCGTCAAG CTCGACTCCG GCCGCGGCCG CAGCGGTACC GGACTGCTGC CGAAGGATTC CGACGGCCGC GCGCCGGACA CCTACTCGAA ACTGGGCCTG ACCGCCAAGG TCAAGGTCTC GCAGAGCGAG CTGAAGGTCG GCACGCTGAT TCCGAAGCTG CCATCGGTAC AACCGAACAA CGGGCGGATC TTCCCGCAGA TCTTCGAGGG CGCCCTGCTC ACCTCGAAGG AAGTCAAGAA CCTCGGCTTC ACCGCCGGGC GCCTGGAGAA GACCAAGATC CGCGATTCGA GCGACTCCGA GGACCTCGCG CTGAACGACA AGAACGGCCG TTTCGCCGGG GTCAGCGCCG ACCACTTCGA CCTCGGCGGG CTGGACTACA AGCTCAGCGA CAACCTCACC GCCAGCTACC ACTACAGCAA TCTGCAGGAC GTCTACCGCC AGCATTTCGT CGGCCTGCTG CATACCTGGC CGATCGGCCC CGGCGAACTG ACCAGCGACC TGCGCTTCGC CCGCAGCACC GATAGCGGCT CGGCCAAGGC CGGCGGCATC GACAACAAGT CGCTCAACGG CATGTTCACC TACAGCCTCG GCAACCACGC CGTCGGCGCG GCCTGGCAAC GAATGAACGG CGACGACGCG TTCCCCTACC TGGAAGGTAG CAACCCGTAC CTGGTCAACT TCGTCCAGGT CAACGACTTC GCCGGTCCCC GGGAGCGCTC CTGGCAACTG CGCTACGACT ACGATTTCGT CGGCCTCGGC ATTCCCGGCC TGACCTTCAT GACCCGCTAC ATCAAGGGCG ACAACATCGA GCTCGCCGGC CAGCGTGGCG AAGGCCGCGA GTGGGAACGC GACACCGAGC TGCAGTACGT GTTCCAGAGC GGCGCACTGA AGAACCTCGG AATCCGCTGG CGCAACGCGA GTTTCCGTTC CAACTTCACC CGCAACGTCG ATGAGAACCG CCTGATCGTC AGCTATACCC TGCCGATCTG GTAA
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Protein sequence | MSTSLPQAAR SVRSSRSTTL TTTAVVLASI APLGNAAGFL EDSKASLETR NFYMNRDFRD GPGQSKREEW AQGFILNLQS GYTQGTVGFG LDAMGMLGVK LDSGRGRSGT GLLPKDSDGR APDTYSKLGL TAKVKVSQSE LKVGTLIPKL PSVQPNNGRI FPQIFEGALL TSKEVKNLGF TAGRLEKTKI RDSSDSEDLA LNDKNGRFAG VSADHFDLGG LDYKLSDNLT ASYHYSNLQD VYRQHFVGLL HTWPIGPGEL TSDLRFARST DSGSAKAGGI DNKSLNGMFT YSLGNHAVGA AWQRMNGDDA FPYLEGSNPY LVNFVQVNDF AGPRERSWQL RYDYDFVGLG IPGLTFMTRY IKGDNIELAG QRGEGREWER DTELQYVFQS GALKNLGIRW RNASFRSNFT RNVDENRLIV SYTLPIW
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