| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4757 |
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| Symbol | algU |
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| ID | 5359587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4890118 |
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| End bp | 4890699 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640813803 |
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| Product | RNA polymerase sigma factor AlgU |
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| Protein accession | YP_001350099 |
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| Protein GI | 152984416 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAACCC AGGAACAGGA TCAGCAACTG GTTGAACGGG TACAGCGCGG AGACAAGCGG
GCTTTCGATC TGCTGGTACT GAAATACCAG CACAAGATAC TGGGATTGAT CGTGCGCTTC
GTGCATGACG CCCAGGAAGC CCAGGACGTA GCGCAGGAGG CCTTCATCAA GGCCTACCGG
GCGCTCGGAA ATTTCCGCGG CGATAGTGCT TTCTATACCT GGCTGTACCG GATCGCCATC
AACACCGCGA AGAACCACCT GGTCGCTCGC GGGCGTCGGC CGCCGGACAG CGATGTGACC
GCAGAGGATG CGGAGTTCTT CGAGGGCGAT CATGCCCTGA AGGACATCGA GTCGCCGGAA
CGGGCGATGT TGCGGGATGA GATCGAGGCC ACCGTGCACC AGACCATCCA GCAGTTGCCC
GAGGATTTGC GTACGGCCCT GACCCTGCGC GAGTTCGAAG GTTTGAGTTA CGAGGATATC
GCCACCGTGA TGCAGTGTCC GGTGGGGACG GTTCGGTCGC GGATCTTCCG CGCCCGTGAA
GCAATCGACA AAGCTCTGCA GCCTTTGTTG CGAGAAGCCT GA
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| Protein sequence | MLTQEQDQQL VERVQRGDKR AFDLLVLKYQ HKILGLIVRF VHDAQEAQDV AQEAFIKAYR
ALGNFRGDSA FYTWLYRIAI NTAKNHLVAR GRRPPDSDVT AEDAEFFEGD HALKDIESPE
RAMLRDEIEA TVHQTIQQLP EDLRTALTLR EFEGLSYEDI ATVMQCPVGT VRSRIFRARE
AIDKALQPLL REA
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