| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4753 |
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| Symbol | mucD |
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| ID | 5354244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4886627 |
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| End bp | 4888051 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640813799 |
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| Product | serine protease MucD precursor |
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| Protein accession | YP_001350095 |
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| Protein GI | 152988178 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.249411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACCC TAAAACGCTG TATGGCTGCG ATGGTGGCCT TGCTGGCCTT GAGCCTGGCG
ATGACGGCCC GGGCAGAATT GCCGGACTTC ACGCCTCTGG TCGAACAGGC GTCGCCGGCG
GTGGTGAATA TCAGTACCCG GCAGAAGCTG CCGGATCGCG CCATGGCGCG CGGGCAGCTG
TCGATCCCGG ACCTCGAAGG CCTGCCACCG ATGTTCCGCG ACTTCCTCGA GCGCAGCATC
CCGCAGGTTC CGCGCAATCC GCGCGGCCAG CAGCGCGAGG CGCAGTCGCT GGGCTCCGGC
TTCATCATTT CCAACGACGG CTACATCCTC ACCAACAACC ACGTGGTGGC CGATGCCGAC
GAGATCCTGG TGCGCCTGTC CGACCGTAGC GAGCACAAGG CCAAGCTGAT CGGGGCGGAC
CCGCGCAGCG ACGTGGCGGT GCTGAAGATC GAGGCGAAGA ACCTGCCGAC CCTGAAGCTG
GGCGATTCGA ACAAGCTGAA GGTCGGTGAG TGGGTGCTGG CCATCGGCTC GCCGTTCGGC
TTCGACCACT CGGTCACCGC CGGTATCGTC AGCGCCAAGG GCCGCAGCCT GCCGAACGAG
AGCTACGTTC CCTTCATCCA GACCGACGTG GCGATCAACC CGGGCAACTC CGGCGGCCCG
CTGCTGAACC TGCAGGGCGA GGTGGTCGGC ATCAACTCGC AGATCTTCAC CCGTTCCGGC
GGCTTCATGG GCCTGTCCTT CGCCATTCCG ATCGATGTCG CGCTGAATGT CGCCGACCAA
CTGAAGAAAG CCGGCAAGGT CAGCCGCGGC TGGCTGGGCG TGGTGATTCA GGAAGTGAAC
AAGGATCTCG CCGAGTCCTT CGGTCTCGAC AAGCCGTCCG GCGCGCTGGT GGCGCAACTG
GTGGAAGACG GCCCGGCAGC CAAGGGCGGC CTGCAGGTGG GCGACGTGAT CCTCAGCCTG
AACGGCCAGT CGATCAACGA GTCCGCCGAC CTGCCGCACC TGGTGGGCAA CATGAAGCCG
GGCGACAAGA TCAACCTCGA GGTGATCCGC AACGGCCAGC GCAAGACCCT GAGCATGGCG
GTCGGCAGCC TGCCGGACGA CGACGAGGAA ATCGCCTCGA TGGGCGCCCC GGGTGCCGAG
CGCAGCAGCA ACCGCCTCGG CGTGACCGTC GCCGACCTCA CCGCCGAGCA GCGCAAGAGC
CTGGATATCC AGGGCGGCGT GGTAATCAAG GAAGTCCAGG ACGGCCCCGC CGCGGTCATC
GGCCTGCGTC CGGGCGACGT CATCACCCAC CTGGACAACA AGGCGGTGAC CTCGACCAAG
GTCTTCGCCG ACGTGGCCAA GGCGCTGCCG AAGAATCGTT CGGTTTCGAT GCGGGTTCTG
CGCCAGGGAC GTGCCAGCTT CATCACCTTC AAGCTGGCCG AATAA
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| Protein sequence | MHTLKRCMAA MVALLALSLA MTARAELPDF TPLVEQASPA VVNISTRQKL PDRAMARGQL
SIPDLEGLPP MFRDFLERSI PQVPRNPRGQ QREAQSLGSG FIISNDGYIL TNNHVVADAD
EILVRLSDRS EHKAKLIGAD PRSDVAVLKI EAKNLPTLKL GDSNKLKVGE WVLAIGSPFG
FDHSVTAGIV SAKGRSLPNE SYVPFIQTDV AINPGNSGGP LLNLQGEVVG INSQIFTRSG
GFMGLSFAIP IDVALNVADQ LKKAGKVSRG WLGVVIQEVN KDLAESFGLD KPSGALVAQL
VEDGPAAKGG LQVGDVILSL NGQSINESAD LPHLVGNMKP GDKINLEVIR NGQRKTLSMA
VGSLPDDDEE IASMGAPGAE RSSNRLGVTV ADLTAEQRKS LDIQGGVVIK EVQDGPAAVI
GLRPGDVITH LDNKAVTSTK VFADVAKALP KNRSVSMRVL RQGRASFITF KLAE
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