Gene PSPA7_4753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_4753 
SymbolmucD 
ID5354244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp4886627 
End bp4888051 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content66% 
IMG OID640813799 
Productserine protease MucD precursor 
Protein accessionYP_001350095 
Protein GI152988178 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.249411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACCC TAAAACGCTG TATGGCTGCG ATGGTGGCCT TGCTGGCCTT GAGCCTGGCG 
ATGACGGCCC GGGCAGAATT GCCGGACTTC ACGCCTCTGG TCGAACAGGC GTCGCCGGCG
GTGGTGAATA TCAGTACCCG GCAGAAGCTG CCGGATCGCG CCATGGCGCG CGGGCAGCTG
TCGATCCCGG ACCTCGAAGG CCTGCCACCG ATGTTCCGCG ACTTCCTCGA GCGCAGCATC
CCGCAGGTTC CGCGCAATCC GCGCGGCCAG CAGCGCGAGG CGCAGTCGCT GGGCTCCGGC
TTCATCATTT CCAACGACGG CTACATCCTC ACCAACAACC ACGTGGTGGC CGATGCCGAC
GAGATCCTGG TGCGCCTGTC CGACCGTAGC GAGCACAAGG CCAAGCTGAT CGGGGCGGAC
CCGCGCAGCG ACGTGGCGGT GCTGAAGATC GAGGCGAAGA ACCTGCCGAC CCTGAAGCTG
GGCGATTCGA ACAAGCTGAA GGTCGGTGAG TGGGTGCTGG CCATCGGCTC GCCGTTCGGC
TTCGACCACT CGGTCACCGC CGGTATCGTC AGCGCCAAGG GCCGCAGCCT GCCGAACGAG
AGCTACGTTC CCTTCATCCA GACCGACGTG GCGATCAACC CGGGCAACTC CGGCGGCCCG
CTGCTGAACC TGCAGGGCGA GGTGGTCGGC ATCAACTCGC AGATCTTCAC CCGTTCCGGC
GGCTTCATGG GCCTGTCCTT CGCCATTCCG ATCGATGTCG CGCTGAATGT CGCCGACCAA
CTGAAGAAAG CCGGCAAGGT CAGCCGCGGC TGGCTGGGCG TGGTGATTCA GGAAGTGAAC
AAGGATCTCG CCGAGTCCTT CGGTCTCGAC AAGCCGTCCG GCGCGCTGGT GGCGCAACTG
GTGGAAGACG GCCCGGCAGC CAAGGGCGGC CTGCAGGTGG GCGACGTGAT CCTCAGCCTG
AACGGCCAGT CGATCAACGA GTCCGCCGAC CTGCCGCACC TGGTGGGCAA CATGAAGCCG
GGCGACAAGA TCAACCTCGA GGTGATCCGC AACGGCCAGC GCAAGACCCT GAGCATGGCG
GTCGGCAGCC TGCCGGACGA CGACGAGGAA ATCGCCTCGA TGGGCGCCCC GGGTGCCGAG
CGCAGCAGCA ACCGCCTCGG CGTGACCGTC GCCGACCTCA CCGCCGAGCA GCGCAAGAGC
CTGGATATCC AGGGCGGCGT GGTAATCAAG GAAGTCCAGG ACGGCCCCGC CGCGGTCATC
GGCCTGCGTC CGGGCGACGT CATCACCCAC CTGGACAACA AGGCGGTGAC CTCGACCAAG
GTCTTCGCCG ACGTGGCCAA GGCGCTGCCG AAGAATCGTT CGGTTTCGAT GCGGGTTCTG
CGCCAGGGAC GTGCCAGCTT CATCACCTTC AAGCTGGCCG AATAA
 
Protein sequence
MHTLKRCMAA MVALLALSLA MTARAELPDF TPLVEQASPA VVNISTRQKL PDRAMARGQL 
SIPDLEGLPP MFRDFLERSI PQVPRNPRGQ QREAQSLGSG FIISNDGYIL TNNHVVADAD
EILVRLSDRS EHKAKLIGAD PRSDVAVLKI EAKNLPTLKL GDSNKLKVGE WVLAIGSPFG
FDHSVTAGIV SAKGRSLPNE SYVPFIQTDV AINPGNSGGP LLNLQGEVVG INSQIFTRSG
GFMGLSFAIP IDVALNVADQ LKKAGKVSRG WLGVVIQEVN KDLAESFGLD KPSGALVAQL
VEDGPAAKGG LQVGDVILSL NGQSINESAD LPHLVGNMKP GDKINLEVIR NGQRKTLSMA
VGSLPDDDEE IASMGAPGAE RSSNRLGVTV ADLTAEQRKS LDIQGGVVIK EVQDGPAAVI
GLRPGDVITH LDNKAVTSTK VFADVAKALP KNRSVSMRVL RQGRASFITF KLAE