Gene PSPA7_4749 details

Gene Information

• Locus tag: PSPA7_4749
• Symbol: rnc
• ID: 5359849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: -
• Start bp: 4882585
• End bp: 4883274
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640813795
• Product: ribonuclease III
• Protein accession: YP_001350091
• Protein GI: 152986476
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.190764
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTAATC CGCTGGACCG ACTCGAGCGC AAGCTCGGCT ATACCTTCAA AGACCAGGAC 
CTGATGGTCC TGGCCCTGAC CCATCGCAGC TACGCCGGGC GCAACAACGA GCGCCTGGAG 
TTCCTCGGTG ACGCCATTCT CAACTTCGTC ATCGGCGAGG CGCTGTTCCA CCACTTCCCG 
CAGGCCCGCG AAGGCCAGCT TTCGCGCCTG CGCGCACGGC TGGTCAAGGG CGAGACCCTG 
GCCCTGCTGG CGCGCGGCTT CGAGGTGGGC GACTACCTGC GCCTGGGCTC GGGTGAGCTG 
AAGAGCGGCG GTTTCCGCCG CGAGTCGATC CTCGCCGACG CGATGGAGGC CCTGATCGGC 
GCCATCTACC TGGACACCGG CATGGACTCC GCGCGCGAGC GGATCATCGC CTGGCTCGGG 
CCGCAGTTGC GCGAGCTGAC CCCGGTGGAT ACCAACAAGG ACCCCAAGAC CCGCCTGCAG 
GAGTTCCTGC AGTCGCGCGG CTGCGACCTG CCGCGCTACG AAGTGGTGGA TATCCAGGGC 
GAACCCCATT GCCGGACCTT CTTCGTCGAT TGCGAAGTGG CCCTGCTGAG CGACAAGACC 
CACGGGCATG GCGGCAGCCG CCGCATCGCC GAGCAGGTGG CCGCGGCCGC CGCGCTGGTG 
GCCCTGGGCG TGGAGAATGG CCATGACTGA 

 

Protein sequence

MSNPLDRLER KLGYTFKDQD LMVLALTHRS YAGRNNERLE FLGDAILNFV IGEALFHHFP 
QAREGQLSRL RARLVKGETL ALLARGFEVG DYLRLGSGEL KSGGFRRESI LADAMEALIG 
AIYLDTGMDS ARERIIAWLG PQLRELTPVD TNKDPKTRLQ EFLQSRGCDL PRYEVVDIQG 
EPHCRTFFVD CEVALLSDKT HGHGGSRRIA EQVAAAAALV ALGVENGHD