| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4727 |
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| Symbol | prpD |
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| ID | 5358552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4853304 |
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| End bp | 4854788 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640813772 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_001350068 |
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| Protein GI | 152984596 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.234183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCA ACGTCGATCT CAACCAACGT CCCGACTACG ACGCCGTCCT GCAGGACATC
GCCGACTACG TGCTGGACTA CCGCATCGAT TCCGCGGAGG CCCTGGACAC CGCCCGCAAC
TGCCTGATGG ATACCCTCGG CTGCGGCCTG CTGGCGCTGC GCTTCCCGGA ATGCACCAAG
CACCTCGGCC CGCTGGTCGA GGGCACCCTG GTCCCGCACG GCGCGCGGGT GCCGGGCACC
TCCTTCCGGC TCGACCCGGT CAAGGCCGCC TGGGACATCG GCTGCATCGT CCGCTGGCTG
GACTACAACG ACACCTGGCT GGCCGCCGAG TGGGGCCATC CCTCGGACAA CCTCGGCGGC
ATCCTCGCCG TCGCCGACCA CCTCTCGCAG AAACGCCTGG CCAACGGCGA AGCGCCGCTG
AGCATGCGCC AGGTACTGGA AGCGATGATC ATGGCCCACG AGATCCAGGG CGTGATCGCC
CTGGAGAACT CGTTCAATCG CGTCGGCCTC GACCATGTGC TGCTGGTCAA GGTCGCTTCC
ACCGCCGTCT GCGCCAAGCT GATGGGAGCC GACCGCGAGC AACTGCTGGC CGCCCTCTCC
CACGCCTTCG TCGACGGCCA GGCCCTGCGC ACCTACCGTC ACGCGCCGAA CGCCGGCTCA
CGCAAGTCCT GGGCCGCTGG CGACGCAACG AGCCGCGGCG TGCGCCTGGC GGACATCGCC
CTGCGCGGCG AGATGGGCAT TCCCGGCGTG CTCAGCGCGC CACAGTGGGG TTTCTACGAT
GTCCTGTTCA GCCACACCAA CAAGGATCTG GCGACCAAGC CCGAAGACAA GCGGCGCTTC
GGCTTCCCCC AGGGCTACGG CAGCTACGTG ATGGAAAACG TGCTGTTCAA GATCAGCTTC
CCCGCCGAAT TCCACGCGCA GACCGCCGCC GAGGCCGCCG TGCGCCTGCA TCCGCTGGTG
AAGGACCGCC TGCAACGGAT CAGCCGCATC GTCATCACCA CCCACGAGTC GGCGATCCGC
ATCATTTCCA AGGTCGGCCC GCTGGCCAAC CCCGCCGACC GCGACCATTG CCTGCAGTAC
ATGACCGCCG TGCCGCTGAT CTTCGGCGAC CTGGTGGCCG AGCACTACGA GGACGCCTTC
CACGCCGCCC ACCCGCTGAT CGATCGCTTG CGCGAGAAAA TGGAGATCGT CGAGGAGCCG
CGCTACAGCC GTGAATACCT GGAGGCGGAC AAGCGCTCCA TCGCCAACGC CGTGGAAGTG
TTCTTCGACG ACGGCAGCAG CACCGGCCAG GTCGCCGTGG AGTACCCGCT CGGCCATCGC
CGCCGGCGCG CCGAAGGCAT CCCGCTGCTG CAGGAGAAGT TCAAGGCCAA CCTGGCCACG
CGCTTCCCGC CGCAGCGCTG CCAGAGGATC TTCGACCTGT GCAGCCACCA GGCATCGCTG
GAAGCCACGC CGGTGAACCG CTTCATGGAC CTCCTGGCGA TCTGA
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| Protein sequence | MSANVDLNQR PDYDAVLQDI ADYVLDYRID SAEALDTARN CLMDTLGCGL LALRFPECTK
HLGPLVEGTL VPHGARVPGT SFRLDPVKAA WDIGCIVRWL DYNDTWLAAE WGHPSDNLGG
ILAVADHLSQ KRLANGEAPL SMRQVLEAMI MAHEIQGVIA LENSFNRVGL DHVLLVKVAS
TAVCAKLMGA DREQLLAALS HAFVDGQALR TYRHAPNAGS RKSWAAGDAT SRGVRLADIA
LRGEMGIPGV LSAPQWGFYD VLFSHTNKDL ATKPEDKRRF GFPQGYGSYV MENVLFKISF
PAEFHAQTAA EAAVRLHPLV KDRLQRISRI VITTHESAIR IISKVGPLAN PADRDHCLQY
MTAVPLIFGD LVAEHYEDAF HAAHPLIDRL REKMEIVEEP RYSREYLEAD KRSIANAVEV
FFDDGSSTGQ VAVEYPLGHR RRRAEGIPLL QEKFKANLAT RFPPQRCQRI FDLCSHQASL
EATPVNRFMD LLAI
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