Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4673 |
Symbol | |
ID | 5355467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4799574 |
End bp | 4801529 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640813720 |
Product | hypothetical protein |
Protein accession | YP_001350017 |
Protein GI | 152984322 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3322] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTAC GTTCGCGCCT GCTCCGGTTG TTCCTGCCGC TGCTGATCGT CAGCCTCGGC GGGATCTGGC TGCTGTCGGA AAGCATCCTG CTCAGCCGTT TCGACCGCGA GGACGAACGG CGCCTGCAGG AAGAGGCGCT GTTCCTGCAG AACAAGCTGG ACTTCGAGCT CAAGCGCCAC CTCGACATCG TCCACACCTA CGCCTGGTGG AACGCCACCT ATCGTTTCAT CCAGAAGCCC GACGACGATT TCGAACGGGA GAACCTTGAC CACGAGATGC TCGACGACCT CGGCTTCGAC TTCGTCCTGT TCCTCGACGA GCGCGGGCGC GTGGCGCTCA GGCAGTGGTC GCCGGCCGCT CCCGGCCAGC GCGTGCTGTT CGGCGCACCC TCGGCGTCCG ACCAGGAGCT GGCACAAGCC CTGGTACGGC GCGCCCTGGA GCTGGGCGCC ATGGATTTCC GGCACGGCAC CGGGCACAGC CTGAGCGAGC TGCTGCTGGT GGACAATCTG CCGACCCTGC TGGTCAGCGT GCCGATCAGC GACAACCAGG GCAGCGCCCC GCCGAAAGGG GTGATCCTCG CCGGCTATTT CCTCGACCAG GAGCGCCTGG GCGGCCTGCG CGAACAGATG AACGCCGACC TGCTGCCGCA GCCCAACGCG CCCACCGACC CGAGCTGGCG AGCCCTCCAC AGCCGCACCG GAACCACCCG CAACCAGGCC CTGCTGAGCC CGCGGCGCTT CCTCGGCGAA CACCGCCAGC AGGTCTCCCT GCAATACCTC AGCTCGCGCG GCGAGCCGCA GCTGCGCTTC GACATCACCA CCCCGCGCCA GCTCTACCTG CAGGGCGAGA AGACCATCAA CTTCTTCCTC GGCACCTCCC TGCTGGTCGC GCTGGGCGCC TTCCTGGTCG GCTACCTGGC CCTGGAACTG TGGGTCCTGC GCCGGGTCCA GCGGCTCAAC CGGGAGGTCG CCGAGGTCGG CCGCAACAGC CACTCGGCGC GCCTGAGCGA CTTCGGCAAC GACGAGCTCG GGCAACTGGG CGGCGAGATG AACCAAATGC TCGAACGCCT CGAACACAGC GAGGCGCGCG ACCGGGCGAT CCTCCAGTCG ATGCGCGACG GCTACTTCGA GATGGACACC GGGGGCGTGA TCCTCACCGT CAACCCCGCG CTCTGTCAGT TGCTCGGCCA CCCCTGCGAA ACGCTGGTCG GCCATCCCTA CTACGAACTG CTCGGCGAGG ACGACCCGGC GCGCACCCGC CAGCCCTTCC AGCGCGCCAT GCAGAGCGGC GCCGGGAAAA CCTTCGCCGT GCCCCTCGAG CGCGCCGACG GCAGCCTCGG CTACTTCGAG GCCACGGTCT CGCTGGTCCA CGACCTGCAG GGCGAACTGC GCGGCTACCG TGGCATCGTC CGCGACGTCA GCGACCAGGT CGCCTACCAG CAGCAATTGC TGGAAATGGC CTACCGCGAC CCGCTGACCG GCCTGGGCAA CCGCAAGGCC TTCGAGGAAC AGCTCGGCCA GGCGTTGTTC CGCGCCGGCA ACGGCGGCGC GGAGATCGCC CTGCTGTACC TGGACCTGGA CCGCTTCAAG GAAGTCAACG ACCGCTTCGG CCACGACATC GGCGACGCCC TGCTGAGGAC CGTCGCCGAG CGCCTGCGCA ACACCCTGCG GCAACCGGAC AAGGCCTATC GCCTGGGCGG CGACGAGTTC GCCGTGCTCC TCGAGGACAG CCAGGCGAAC AGCCCCGCGC GCCTCGCCGA ACGGCTGCTG GCGGCGCTGG TCCAGCCCAT CGCGCTGGGC GGCGAGCACA TCGACTTCGT CACCCCGAGC ATCGGCATCG CGCTTTATCC ACGGCATGCC GGCGACGCCG AGGGCCTGGT GCGCGCCGCC GACAGCGCCA TGTACCAGGC CAAGCGACAA CGCAACCGCT ACTGCCTGTA CCAGGCGCCC TCCTGA
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Protein sequence | MPLRSRLLRL FLPLLIVSLG GIWLLSESIL LSRFDREDER RLQEEALFLQ NKLDFELKRH LDIVHTYAWW NATYRFIQKP DDDFERENLD HEMLDDLGFD FVLFLDERGR VALRQWSPAA PGQRVLFGAP SASDQELAQA LVRRALELGA MDFRHGTGHS LSELLLVDNL PTLLVSVPIS DNQGSAPPKG VILAGYFLDQ ERLGGLREQM NADLLPQPNA PTDPSWRALH SRTGTTRNQA LLSPRRFLGE HRQQVSLQYL SSRGEPQLRF DITTPRQLYL QGEKTINFFL GTSLLVALGA FLVGYLALEL WVLRRVQRLN REVAEVGRNS HSARLSDFGN DELGQLGGEM NQMLERLEHS EARDRAILQS MRDGYFEMDT GGVILTVNPA LCQLLGHPCE TLVGHPYYEL LGEDDPARTR QPFQRAMQSG AGKTFAVPLE RADGSLGYFE ATVSLVHDLQ GELRGYRGIV RDVSDQVAYQ QQLLEMAYRD PLTGLGNRKA FEEQLGQALF RAGNGGAEIA LLYLDLDRFK EVNDRFGHDI GDALLRTVAE RLRNTLRQPD KAYRLGGDEF AVLLEDSQAN SPARLAERLL AALVQPIALG GEHIDFVTPS IGIALYPRHA GDAEGLVRAA DSAMYQAKRQ RNRYCLYQAP S
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