Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4658 |
Symbol | |
ID | 5359743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4783998 |
End bp | 4786454 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640813705 |
Product | hypothetical protein |
Protein accession | YP_001350002 |
Protein GI | 152986044 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.142401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCAGA ACCGGACTCT CGACAAGCCC CGCCTGCTCG GCCTGGTATG GCCCTTCATC GTCGTGGTGT TGCTGCAGGC CATGCTCGCG GGAGGCAGTC TCTATGTCCT CTCCGCGGTG CGCAGCTACG TCGGTGGCGA AAGCCTCTGG TCGAAGGGCC AGAAGGACGC CATCTACTAT CTCACCCTGT ACGCCGACTC GCGTGCCGAC GAAGACTTCC ATCGCTACGA GGAAGCCATC GCGATTCCCC TCGGCGACCG CGAGATGCGC CTGGCGCTGG ACCAGCCCGA CCCCGACATC GAGGCAGCGC GGCAGGGTAT CCTCAAGGGC GGCAACCACC CCGACGACGT TACCGCGATC ATCTGGCTGT ACCGCAACTT CCACGACTTC AGCTATTTCG AACGGGCCAT CGAGCTGTGG CTGGTGGGCG ACAAGTACGT CATGGAACTG ATCGACGTCG CCGCCGCCAG GATGCGCGCG GGGATCGGCG CCGGGCAGGC CGGCGCCGAG CAGGTACTCC AGTGGAAGAG CGAGATCCAC GCGATCAACG AGAAGGTCAC GCCGGCGGCC AAGGCCTTCA GCGACGCCCT TGGCGAAGGC TCGCGGGCGC TGCTCAGGTT GCTGCTGGTG GCCAACCTGG CGACCGCCAG CGTGCTGATC CTTCTGGCGT TCCTGCGCAC TCGCCAGCAG CTGATGCAGC GCCAGGAGGT GGAGAACGCC CTCGACGCCG AGCGCGAGCG GGCGCAGATC ACCCTGGCAT CGATCGGCGA CGGGGTCATC ACCGCCGACA CCGAGGGGGG CATCTCCTAC CTCAACCCAG CCGCCGAGCA GATGACCAAT TGGACCCTGG ACAAGGCCCG CGGCCTGCCC CTGGCGTCGC TGTTCCGGAT CGTCGACGAA AGCTCGCGGG AGGAGGGCAT GCTGCTGATC GAGCAGATCC TCAGCGGCGA GATCGACGGC GGCCGCGAGC ATTCCAAGCT GGTCCTGCGC CACGACGGCA GCAGCGTGCC GGTGACCCTG GTGGGCGCGC CGATCCACCG CGGCGGCGAG ATCACCGGGG TGGTGCTGGT GCTCCACGAC ATGACCCGCG AGCGCCAGTA CATGGCGCGC CTGTCCTGGC AGGCGACCCA CGACGCGCTG ACCGGCCTGA CCAACCGTCG TGAATTCGAA TACCGCCTGC AGATGGCGTT GGAGCGCCTG GAGCGAAGCA ATGGGCGGCA CGCGCTGATG TTCCTCGACC TGGACCAGTT CAAGCTGGTC AACGACACCT GCGGGCACGC CGCCGGCGAC GAACTGCTGC GCCAGGTCTG CACCCTGCTG CAACAGGGCC TGCGCGAAGG CGACACGCTG GCGCGGCTGG GCGGCGACGA GTTCGGCATC CTGCTGGAGA ACTGCCCGGC GGAGAAGGCC GTGGAGATCG CCGACCACCT GCGCAAGACG GTGCAGGACC TGCACTTCAC CTGGAGCGGA CAGCCGTTCA ATTGCACCGT CAGCGTCGGC CTGGTGCATC TGCTGCCGGG TATCTCGACC CTCGAGGAAG CGCTGCGCTC GGCCGACATG GCCTGCTACA TGGCCAAGGA AAAAGGCCGC AACCGGGTCC AGGTGTTCCA CCAGGACGAC GTCGAGCTGT CGATGCGCTT CGGCGAGATG ACCTGGGTCC AGCGTATCCA CCTGGCGCTG GAGGAGGATC GCTTCAGCCT CTATGCCCAG CCCATCGTGC CGCTGGGCGA AGACGGCGAA GGCCCGCATG TCGAACTGCT GCTGCGCCTG CGCGACGAGG ACGGGCGGCT GGTGCCGCCG CTGAGCTTCA TCCCCGCCGC CGAGCGCTAC GGCCTGATGA CCCTGATCGA CCGCTGGGTG GTGGAGAACG CCTTCAGGAC CCTCGCCGAG CGCGCCGAAG ACCCCGATGC GGAACCGATC GGCACCTGCG CCATCAATCT TTCCGGGGCG ACCATCGGCG ACGAATCGTT CCTGCAATTC CTCAACGAGC AGTTCGCCCG CTATCGCATC CCGCCGCAGA GCATCTGCTT CGAGGTCACC GAGACCGTGG CGGTGGCCAA CCTGGCCAGC GCGATCCGCT TCATCAACGA GCTCAAGGAC ACCGGTTGCC GTTTCTCCCT GGACGATTTC TGCGCCGGCA TGTCGTCGTT CATATACCTC AAGCACCTGC CGGTGGATTA CCTGAAGATC GATGGCAGCT TCGTCAAGGA CATGCTCGAG GATCCCATCG ATCGCGCCAT GGTCCAGGTG ATCAACCACA TCGGCCACGT CATGGGCAAG CGCACCATCG CCGAGTTCGT CGAGACCGCG GAAGTGATGG AGGCCCTGCG CGAGATCGGC ATCGACTATG CCCAGGGCCT GGCCATCGGC GCGCCCCTGC CGTTCAGCCA CCAACCTCCC GGCGGCGGGG TGGGCGCGGA GGGTTTGCGG CCGAGCCTCG GACAGAACCT CCGGTAG
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Protein sequence | MRQNRTLDKP RLLGLVWPFI VVVLLQAMLA GGSLYVLSAV RSYVGGESLW SKGQKDAIYY LTLYADSRAD EDFHRYEEAI AIPLGDREMR LALDQPDPDI EAARQGILKG GNHPDDVTAI IWLYRNFHDF SYFERAIELW LVGDKYVMEL IDVAAARMRA GIGAGQAGAE QVLQWKSEIH AINEKVTPAA KAFSDALGEG SRALLRLLLV ANLATASVLI LLAFLRTRQQ LMQRQEVENA LDAERERAQI TLASIGDGVI TADTEGGISY LNPAAEQMTN WTLDKARGLP LASLFRIVDE SSREEGMLLI EQILSGEIDG GREHSKLVLR HDGSSVPVTL VGAPIHRGGE ITGVVLVLHD MTRERQYMAR LSWQATHDAL TGLTNRREFE YRLQMALERL ERSNGRHALM FLDLDQFKLV NDTCGHAAGD ELLRQVCTLL QQGLREGDTL ARLGGDEFGI LLENCPAEKA VEIADHLRKT VQDLHFTWSG QPFNCTVSVG LVHLLPGIST LEEALRSADM ACYMAKEKGR NRVQVFHQDD VELSMRFGEM TWVQRIHLAL EEDRFSLYAQ PIVPLGEDGE GPHVELLLRL RDEDGRLVPP LSFIPAAERY GLMTLIDRWV VENAFRTLAE RAEDPDAEPI GTCAINLSGA TIGDESFLQF LNEQFARYRI PPQSICFEVT ETVAVANLAS AIRFINELKD TGCRFSLDDF CAGMSSFIYL KHLPVDYLKI DGSFVKDMLE DPIDRAMVQV INHIGHVMGK RTIAEFVETA EVMEALREIG IDYAQGLAIG APLPFSHQPP GGGVGAEGLR PSLGQNLR
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