| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4657 |
|---|
| Symbol | |
|---|
| ID | 5355820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4783141 |
|---|
| End bp | 4783923 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640813704 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001350001 |
|---|
| Protein GI | 152986832 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.95753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGT TCTTTGACCG TACGGGCCCC TTGCAGGAGG CGGGAAGCTA TCCGCAGTGG
GCGCAGCAAC TGATCGTCGA CTGCCAGGCG AGCAAGGACC GGGTGTCCGG CCACGAGCTG
TACCGGCGCA TGCGCGACGC CGAGCTGAGC CCGGCGCTGA TGCGCCTGTA CCTGATCGGC
GGCTGGCCGG TGGTCGAGCA GTTCCCCTTG TACATGTCGC AGAACCTGCT GAAGACCCGT
TTCGCCCGCC ACCCCGGCGA AGACATGGCG CGCCGCTGGC TGATGCGCAA CATCCGCGTC
GAGCTCAACC ACGCCGACTA CTGGCTGCAC TGGGCCGAGG CCCATGGCGT GAGCCTGGCC
GAGATCCAGG CGCAGGACGT GCCCGCCGAG TTGCACGCAC TCAGCCACTG GTGCTGGCAC
ACCTGTTCCA GCGATTCGCT GGCGGTGGCC ATGGCCGCCA CCAACTACGC CATCGAGGGC
GTCACCGGCG AGTGGTCGGC GCTGGTCTGT TCGAACGGCG TCTACGAGAA CGCCTTTCCC
AGGGAAGGCC GCAAGCGAGC CATGAAGTGG CTCAAGCTCC ACGCCCAATA CGACGATGCC
CATCCCTGGG AGGCCCTGGA GATCATCTGC ACCCTGGCCG GCACCAATCC CAGCGCCGAG
CTGCGCCGGC AACTGCGCGA CGCGGTCTGC AAGAGCTACG ACTACATGTA CCTGTTCCTC
GAGCGCCTGA TGCAGCTGGA GACGGCGCGT AGCGGGCGCA AGCTGGCGGT TGGCGTGGAA
TAG
|
|---|
| Protein sequence | MSEFFDRTGP LQEAGSYPQW AQQLIVDCQA SKDRVSGHEL YRRMRDAELS PALMRLYLIG
GWPVVEQFPL YMSQNLLKTR FARHPGEDMA RRWLMRNIRV ELNHADYWLH WAEAHGVSLA
EIQAQDVPAE LHALSHWCWH TCSSDSLAVA MAATNYAIEG VTGEWSALVC SNGVYENAFP
REGRKRAMKW LKLHAQYDDA HPWEALEIIC TLAGTNPSAE LRRQLRDAVC KSYDYMYLFL
ERLMQLETAR SGRKLAVGVE
|
|---|
| |