| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4654 |
|---|
| Symbol | |
|---|
| ID | 5358526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4781055 |
|---|
| End bp | 4781843 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640813701 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001349998 |
|---|
| Protein GI | 152984280 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGAC CCGCCCCACC CGACCTGAGC GATAGCCGCC GGCCCTTGCG CGGCGTCGCC
CGCAGCTATC CTGCCGGGCA CCGCGTCGAT GCCCACGCGC ACGCCTGGGG CCAGGTGCTC
TACGCGGTAT CCGGGATGAT GTGGCTGGAA ACGCCCGACG AGGCCCTGCC GGTCCCGCCG
CAACGGGCGG TCTGGTTGCC TCCGGGCCTG CGCCATGCGG TGCGGGTCGC CTCCGAGTTG
CAGATGCGCA ACATCTACCT GAGCCCGGAA CTCTCCCGCG GCCTGGAAGA CCGCACGCTG
GTGCTGGTGG TCGGCCCGCT GCTGCGCGAA CTGATCGTCG GCCTGGTGGA GCAGGAGCGG
CAGAGCGAGC CCGCCTATTA CCAGGCACTG GCCAGCCTCG CCGTGCTCGA ACTCGGCCGC
GCCCGCCGCT CCAGCCTGCG CGTGCCGCTG CCGGACGCCT CTGACCGACG CCTGCTCGCG
CTGTGCCAGG CGGTGATGGC CAACCCGTCG CTGGAGATCG GCCTGGAGCG CCTGGCCGAG
GACGCCGGGG CCAGCGTGCG CACGCTCTCG CGGCTGTTCC AGCGCGGCCT GGGCATGGGC
TTCGCCGACT GGCGCCGGCA GGTACAACTG GCCACCGCCG CCGCCGCGCT GATCGATGGC
CGCGCGGTGA GCCGCATCGC CCACGAACTG GGCTATACGC CCAGCGCCTT CAGCGACATG
TTCCGTCGCG AACTGGGCGT CTCGCCCAGC GAATACAAGG CCGAGCACCA CCAGCCGAGC
CTGCCTTGA
|
|---|
| Protein sequence | MARPAPPDLS DSRRPLRGVA RSYPAGHRVD AHAHAWGQVL YAVSGMMWLE TPDEALPVPP
QRAVWLPPGL RHAVRVASEL QMRNIYLSPE LSRGLEDRTL VLVVGPLLRE LIVGLVEQER
QSEPAYYQAL ASLAVLELGR ARRSSLRVPL PDASDRRLLA LCQAVMANPS LEIGLERLAE
DAGASVRTLS RLFQRGLGMG FADWRRQVQL ATAAAALIDG RAVSRIAHEL GYTPSAFSDM
FRRELGVSPS EYKAEHHQPS LP
|
|---|
| |