Gene PSPA7_4642 details

Gene Information

• Locus tag: PSPA7_4642
• ID: 5354208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 4766323
• End bp: 4771278
• Gene Length: 4956 bp
• Protein Length: 1651 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640813689
• Product: hemolysin
• Protein accession: YP_001349986
• Protein GI: 152989608
• TIGRFAM ID: [TIGR01901] filamentous haemagglutinin family N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.154721
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAGAG ACAATCCTGT CTTCCACCTC TCCCCCCGGG GAAAACTCCG TTGCCTGATC 
GCCGGCCTGC TGCTGGCGCC CCACCTGCCC CAGGCTTTCG CCGGCGGGCT GGAGGCGGCC 
GGCGGGCCGG GCGGCACGCC GCAACTGCTC AACCAGGGCG GCGTGCCCAT CGTCAATATC 
GTCGCGCCGA ACGCCGCCGG CCTGTCGCAC AACCAGTTCC TCGACTACAA CGTCGACCGC 
CAGGGCCTGG TCCTCAACAA TGCGCTGCAA GCCGGCGCCT CGCAGCTCGC CGGACAACTG 
GCGGCCAACC CGCAGCTGCG CGGCGACGCC GCCAGTGCCA TCCTCAACGA AGTGATCAGC 
CGCAACGCCT CGGCGATCAA CGGCCCGCAG GAAATCTTCG GCCAGGCCGC CGACTACATC 
CTGGCCAACC CCAACGGCAT CTCGGTGAAC GGCGGCAGCT TCATCAACAC GCCCCATGCC 
AGCCTGCTGG TCGGCCGTCC GGAACTGGCC GACGGCAAGC TGCAGGCGCT GAACACCAAC 
GACGCCGTCG GCGCCCTGCA GATCCAGGGC CAGGGCCTGA GCAACCGGGA TGGCAGCATC 
GCCCTGCTGG CGCCGCGAGT CGACAGCCAA GGCAAGATCG AGGCGTCGGC CGAGCTCGAC 
CTGACCGTCG GTCGCAACCG CATCGACTAC CCGAGCGGCA AGGTCGAGCG CGACCCGTCC 
GGCGACGTCC GTCCGGGCGA GCGGCGCATC GACGCCAGCC TGTTCGGCGC CATGCAGGCC 
GGACGCATCA ACATCCTCAG CACCGCCGAG GGCGCCGGCG TGCGCGTCGG CCCGGTCGGG 
ATCGACGGCA GGGACGGCGT CGACCTGCGC TCCGCCGGCG ACCTGTCGAT CAGCGGCCAG 
GCGCTTCCCG ACAACAGCCT GAACGCCTTG CGCGCGGCGA TCCGCAGCGA CAGCGGCAAC 
GTCGGCCTGC ATGCCCGCGG CGACCTGAGC CTGGCCGCCG CCGACGTCAG CGGCGGCAGG 
GTCGACCTCA AGTCCGGGCG CAACCTGACC CTGGGCAGCG TGGAAAGCCG CAACCTGCGG 
GAAAGCCGCG AGCGCTGGAG CAACAGCACC ATCGGCATCA CCTGGGAAAC CTACGACCGC 
ACGCGTACCG TCACCGATTC GAAGCAGCAC GGCAGCCGGA TCGATGCCCG CGCCGACGCG 
AGCCTGGCCG CGCGGGGCGA CAGCGAACTG AGGGCGGCGA CGGTCAAGGC CGGCGCTACC 
CTGAAAGTCT CCAGCGGCGG CGATACCCGT CTTCTCGCCG CCACCGAGAC CCGCACCGAA 
CGCGACCAGG GCGCGCACCG CAAGCACCTG TGGAAAGCCA ACTGGGACAA GGGCAGCAGC 
GAGCAACGCA GCGTGGCCAG CAGCCTCGAA GGCGCGCGGG TCGAACTCGG CGGCGGCCGG 
CGCCTGAATC TGGAAGGCGC CGACGTGGCC AGCCGCGGCG ACCTCGACCT GCAAGCCAAG 
AGCGTCGACA TCGGCAGCGC CAGCCGCAGC CACAGCAGCC GCGACAACAG CTACTCCGGC 
GACCTGGTCG GCGGCAGCTT CTTCGGCAGC CACGGCGATG GCGACAGCGG CAAGACCCTG 
CAACAGGGCA GCCGGGTCAA GGCCGACGGC GCACTGACGG TGACCGCCGA TGCGGTCGAG 
GTGCGCGGCA GCCAGGTACG CGGCGCGCGC AAGGCCGAGG TAGTCAGCGG GAAAGGCTCG 
CTGCGCATCG ACGGCGTGGA GGAAACCGCC CACAGCAACA GCTACAGCAA GGACAGCAAG 
TTCTTCGGCA TCGCCAAGGA CGAGAGTCGC CAGCGCAGCA AGGACAGCAG CAACCGCGCC 
AGCGAAGTAC GCTCGGACAG CAACCTGACC CTGCGCAGCG CCGCCGACAT CGCCATTCGC 
GGCTCCCGGG TCGAGGCTGG CGGCGCCCTC GCCGCCGAGG CCAAGGGCAA CCTGGAGATA 
GCCTCGGCGC AGGAGCGCCA CGACGGCAAC GACAGCCGCC ACACCCGCGG CTTCGACGCC 
TATGCCGGCG AGCAGACCCC AGGCAGCCGC CAATACCGCG CCGGGGTGCG CTACCAGGAC 
CAGCGGACCA GCGTCCGCCG CGAGGAAACC CGCAACAGCG GCTCCAGCCT GGGCGGCGCC 
TCCCTGGCCG TGAAGGCCGG CGGCGATCTC ACCGTGAAGG GGGCCGAGCT GAAGGCCAGC 
GCGGGCGACG CCAGCCTCTC CGGGAAGAAC GTCGCCCTGC TCGCCGAGCA GGACAGCAAG 
ACCCGCAGCA GCGAACAGAC CACCACCGGC GGCGGCTTCT ACTATACCGG CGGCCTGGAC 
CGTGCCGGCA GCGGTATCGA AGTCGGCCAC CAGCGGATCG ACGAGAACGA CGCCGAAAGC 
CATGCGCGCA CCAGCCAGGT GAACGCGACG GGCAATCTCA GGATCGACGC CGCCCAGGGC 
AGCCTGACGA CGCAGGGCGC GCGCCTGGAG GCCGGCGACA GCCTGGCGGT CGCCGCCGGC 
ACGGTCGACA ACCAGGCCGC CCGCGACAGC CAGAGCAGCC AGCGCCACGA CAGCGGCTGG 
AGCGGCGACA TCGGCGCCAA CCTCGAGTAC CGCGGCATCG CCCGGCCGAT CGAGAAGGCG 
GTCGAAGGCG TCGCCCAGCG CAAGGTCCAC CAGCCCGGCC TGCTCGACAA CCTGGAGCAG 
CCGAACGTCG GCGTCGACCT CGAGATCAGC CACCGCGACA GCCGCGGCGA GCAACAGGCG 
AGCCAGGCGC AGGTCAGCAG CTTCGCGGGC GGCCAGGTCG AACTGAAGGT CGGCGACGCC 
CTGCGGGACG AGGGCACCCG TTACCAGGCT CGCAGCGGAG GCCTCCTCAT CGACGCCGCC 
AGGCATGACG CCAGGGCGGC GGAGAACACC TCCGGCAGCC ATGAGCAGAG CCTCGACGCC 
AAGGTCGGCG GGCGCCTCTA CACCACCACC GGCCAGGACC TGAACCTGCG CCTGAGCGGC 
ATTGGCGGCA GCAGCGAGAA CAGCGCCAGC CAGACCACCG CGGTGGTCGG CGAATACGCC 
GCGAAGCAGG GCGTCGAGAT CCGCCTCGGC GGAGACGGCC TCTACCAGGG CAGCCGCTTC 
GACGGCGGCG AAGCCGGGGT CAGGCTCAGC GCCGGCGGCA ACCTGGCCCT GGAACAGGCC 
AACGACCGGC AGAGCGCCAG CAGCGCCAGC CTGCGTGGCG ACGCCGCGTT GAGCGGCGGC 
ATGGCCCCCA GCGCCAACGG CAAAGGGCTG AACGCCAGCG CCGGCCTGCA ACTCGACCAC 
AAGGCCGGCG ACAGCCGGGA CAGCCAGGCG CGGGTCGCCG ACATCCAGGC CAAGGGCGCG 
GTGGAGCTGC GCAGCGGCGG CGATCTGGTC CTGCAAGGCA GCAATATCGG CAGCGCGGCA 
GCGAAGACCG GCGACATAGT CCTGGCCGCC GGCGGCAAGC TCGACCTGCA GGCCGCCCGC 
GATAGCCACC GGGCCGGGGG AAACAACCTC GGCGGCGGCT TCAGCCTAGG CGGCGGCAGC 
GTTCGCGACG CCGAAACGAG CAGCAAGAAC GGCAGCGTCA GCGGCAACTT CAACATCGGC 
CGGGTCGACG AGGAACGTCA CGCGCTGAAC GGCGGCAACC TGCACAGCGC GACCAAGGCC 
AGCCTTTCCA GCGCCGCAGA CGACGCCACC GCGGTACGCC TGCAAGGCAC TCGCATCGAA 
GCCGCCCAGG TCAGCCTCGA AGCCGGCAAC GGCGGCATTC TCCAGGAGTC CGCCGAATCC 
AGCGAGCGGC GCGACAACTG GGGCGTGCTG CTCGGTGCCG GGGCCAACGG CGGCAAGACC 
ACCGGCGCGC CGAGCGACTA CCGGAGCGAC TATGCCGTCC AGGCCCGCGC CAAGGTCGAT 
GTCGATGTCC TGCGCAGCCA GACCCAGGGC GACAGCGTCA TCCAGGCCGA CCGGGTAATC 
CTGGCGAGCC AGGGCGACAC CCGCCTGGAG GGCGCGCGCA TCGACGCGGC ACAGGTGGAC 
GGGCGCATCG GCGGCGACCT GCGGGTGGAG AGCCGCCAGG ACCGCGCGGA GGGCGTGAAG 
GTCAACGTCG ACGCGCGCCT GGGCGTGGAG AAGAACCAGC CCGGCCTGGT GAACAAGCTG 
GCGAGCAAGA CCGGACCGTT GAAGGACAAG CTGGAAACCA AGGCCGAGAA TGCTTTCGAC 
AAGCACCGCG GCAAGTTGGA GAACGGCATC GACCGTAATG TCGAGCGGCT CGGCAAGGCC 
GGGGACAACC TCCTCGCCAA AGCCGAAAAG GCCAAGGAGC GCCTGGGCGA GAAGCTGGTC 
CGCAGCGGCA GCTACGAGGT CAACCCGGAG CCGCGCGGCG CCTTCGCCAG CAAGCTGGAC 
AGGGCCAGGG GCTATCTGGC GGAGAAAGGC GAAGCGCTCG GCGACCGGCT GTCCGGCCTC 
AAGCAGCGCC TGTCGCCGAA CAAGACCGGT AGCTATGTGG TGAACGACAA GCAGACGGCC 
GGCGCCAAGG TCGGCAATGC CGCCGAGAAC GTGCTGTTCG GCGACAAGAG CGGCGAAGCC 
TCGGTAACCC CGACGCTGTA CCTGGACGTC AGCCACGTCA GCCGCAACTA CGTCACCGAG 
GCCTCCGGCA TCACCGGCAG GCAGGGCGTG AACCTGCAGG TGGGCGCAGC GACCCAGCTG 
ACCGGCGCAC GGATCAGCGC CAGCGACGGC AAGGTCGACC TCGGCGGCTC GCGCGTGGAA 
ACCCGCGCCC TGGCCGGCAA GGACTACCGC GCCGATCTCG GCCTGAACGT CTCCAGGTCG 
CCGGTGGACC TGGCCTTCGG TATCAAGGAC GAGTTCAGCC AGGAGCACGA CCAGGCGACC 
CGCGACGACC AGGCCTTCAA CCTCGGCGCC CTGCGCGTCG GCGGACGCAA CCGCGACCAG 
CAGTTGCAGG CCGGCATCGA GCAGAAGGCC GACTGA 

 

Protein sequence

MHRDNPVFHL SPRGKLRCLI AGLLLAPHLP QAFAGGLEAA GGPGGTPQLL NQGGVPIVNI 
VAPNAAGLSH NQFLDYNVDR QGLVLNNALQ AGASQLAGQL AANPQLRGDA ASAILNEVIS 
RNASAINGPQ EIFGQAADYI LANPNGISVN GGSFINTPHA SLLVGRPELA DGKLQALNTN 
DAVGALQIQG QGLSNRDGSI ALLAPRVDSQ GKIEASAELD LTVGRNRIDY PSGKVERDPS 
GDVRPGERRI DASLFGAMQA GRINILSTAE GAGVRVGPVG IDGRDGVDLR SAGDLSISGQ 
ALPDNSLNAL RAAIRSDSGN VGLHARGDLS LAAADVSGGR VDLKSGRNLT LGSVESRNLR 
ESRERWSNST IGITWETYDR TRTVTDSKQH GSRIDARADA SLAARGDSEL RAATVKAGAT 
LKVSSGGDTR LLAATETRTE RDQGAHRKHL WKANWDKGSS EQRSVASSLE GARVELGGGR 
RLNLEGADVA SRGDLDLQAK SVDIGSASRS HSSRDNSYSG DLVGGSFFGS HGDGDSGKTL 
QQGSRVKADG ALTVTADAVE VRGSQVRGAR KAEVVSGKGS LRIDGVEETA HSNSYSKDSK 
FFGIAKDESR QRSKDSSNRA SEVRSDSNLT LRSAADIAIR GSRVEAGGAL AAEAKGNLEI 
ASAQERHDGN DSRHTRGFDA YAGEQTPGSR QYRAGVRYQD QRTSVRREET RNSGSSLGGA 
SLAVKAGGDL TVKGAELKAS AGDASLSGKN VALLAEQDSK TRSSEQTTTG GGFYYTGGLD 
RAGSGIEVGH QRIDENDAES HARTSQVNAT GNLRIDAAQG SLTTQGARLE AGDSLAVAAG 
TVDNQAARDS QSSQRHDSGW SGDIGANLEY RGIARPIEKA VEGVAQRKVH QPGLLDNLEQ 
PNVGVDLEIS HRDSRGEQQA SQAQVSSFAG GQVELKVGDA LRDEGTRYQA RSGGLLIDAA 
RHDARAAENT SGSHEQSLDA KVGGRLYTTT GQDLNLRLSG IGGSSENSAS QTTAVVGEYA 
AKQGVEIRLG GDGLYQGSRF DGGEAGVRLS AGGNLALEQA NDRQSASSAS LRGDAALSGG 
MAPSANGKGL NASAGLQLDH KAGDSRDSQA RVADIQAKGA VELRSGGDLV LQGSNIGSAA 
AKTGDIVLAA GGKLDLQAAR DSHRAGGNNL GGGFSLGGGS VRDAETSSKN GSVSGNFNIG 
RVDEERHALN GGNLHSATKA SLSSAADDAT AVRLQGTRIE AAQVSLEAGN GGILQESAES 
SERRDNWGVL LGAGANGGKT TGAPSDYRSD YAVQARAKVD VDVLRSQTQG DSVIQADRVI 
LASQGDTRLE GARIDAAQVD GRIGGDLRVE SRQDRAEGVK VNVDARLGVE KNQPGLVNKL 
ASKTGPLKDK LETKAENAFD KHRGKLENGI DRNVERLGKA GDNLLAKAEK AKERLGEKLV 
RSGSYEVNPE PRGAFASKLD RARGYLAEKG EALGDRLSGL KQRLSPNKTG SYVVNDKQTA 
GAKVGNAAEN VLFGDKSGEA SVTPTLYLDV SHVSRNYVTE ASGITGRQGV NLQVGAATQL 
TGARISASDG KVDLGGSRVE TRALAGKDYR ADLGLNVSRS PVDLAFGIKD EFSQEHDQAT 
RDDQAFNLGA LRVGGRNRDQ QLQAGIEQKA D