| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4630 |
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| Symbol | |
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| ID | 5356120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4752116 |
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| End bp | 4753111 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640813677 |
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| Product | C4-dicarboxylate-binding periplasmic protein |
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| Protein accession | YP_001349974 |
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| Protein GI | 152984609 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.93068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGA CGATGGTACG GGCGCTGCTG TGCGCCCTGG CGATCGGTGG CTCCTGCCTG
GCGAATGCCG CGCAGCCGAT CGTCATCAAG TTTTCCCACG TGGTCGCGGA AAACACGCCC
AAGGGCCAGG GTGCGCTGCT GTTCAAGAAA CTCGTCGAAC AGCGCCTGGC CGGACGGGTC
GAGGTGGATG TCTACCCCAA CTCCTCGCTA TTCGGCGACG GCAAGGAAAT GGAGGCGCTG
CTGCTGGGCG ACGTGCAGAT GCTCGCGCCG TCCCTGGCCA AGTTCGAGCA GTACACGCGC
AAGGTGCAGA TATTCGACCT GCCGTTCCTC TTCGACGACA TCCAGGCGGT CGACCGCTTC
CAGCGCAGCC CGCAGGGGCG CGGCCTGCTG ACCAGCATGC AGGACAAGGG CATCCTCGGC
CTGGCCTACT GGCACAACGG CATGAAGCAG CTCTCGGCCA ACCGCCCGTT GCTGGAGCCG
GAAGACGCGC GCGGCCTGAA GTTCCGCGTG CAGGCGTCCG ACGTGCTCAA CGAGCAGTTC
CGCCAGTTGC GCGCTATCTC CCGGAAGATG TCCTTCGCCG AGGTCTACCA GGGCTTGCAG
ACCGGCGTGG TGAATGGCAC CGAGAACACC TGGTCGAACT ACGAGAGCCA GAAGGTCAAC
GAGGTGCAGA AGTATTTCAC CGAGTCCAAC CACGGCCTGG TGGACTACAT GGTGATCACC
AACGCGAAGT TCTGGAACGG CCTGCCGGCG GACATCCGCG AGGAGCTGCA GCGGATCATG
GAGGAGGTCA CCGCGCAGGT GAACCTCGCG GCCGAGCGCC TCAACCGCGA CGCCCGCCAG
CGCATCCTCG CCAGCGGCGC CAGCGAGATC CATACCCTGA GCCCGCAGCA GCGCGCCGAC
TGGCGCCAGG CGATGCAGCC GGTATGGCAG AAATTCCGTG GCAATGTCGG CGCTGACCTG
CTCCAGGCCG CCGAAGCCTC CAACCGTCCC GATTGA
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| Protein sequence | MFKTMVRALL CALAIGGSCL ANAAQPIVIK FSHVVAENTP KGQGALLFKK LVEQRLAGRV
EVDVYPNSSL FGDGKEMEAL LLGDVQMLAP SLAKFEQYTR KVQIFDLPFL FDDIQAVDRF
QRSPQGRGLL TSMQDKGILG LAYWHNGMKQ LSANRPLLEP EDARGLKFRV QASDVLNEQF
RQLRAISRKM SFAEVYQGLQ TGVVNGTENT WSNYESQKVN EVQKYFTESN HGLVDYMVIT
NAKFWNGLPA DIREELQRIM EEVTAQVNLA AERLNRDARQ RILASGASEI HTLSPQQRAD
WRQAMQPVWQ KFRGNVGADL LQAAEASNRP D
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