| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4628 |
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| Symbol | |
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| ID | 5359477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4750149 |
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| End bp | 4751432 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640813675 |
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| Product | C4-dicarboxylate transporter |
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| Protein accession | YP_001349972 |
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| Protein GI | 152986417 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.60895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGC TGATCCTGTT CCTGCTGCTG TTCCTGTTCA TGTTCATCGG CGTGCCCATC
GCCATCTCCC TGGGGCTGTC CGGCGCGCTG ACGATCCTGC TGTTCAGCCC GGACTCGGTA
CGCTCGCTGG CGATCAAGCT GTTCGAGACC TCCGAGGCCT ACACGCTACT GGCGATCCCG
TTCTTCCTGC TCTCCGGCGC GTTCATGACC ACCGGTGGCG TGGCGCGGCG CCTGATCGAC
TTCGCCAACG CCTGCGTCGG GCACATCCGC GGCGGCCTGG CGATCGCCGC GGTGCTCGCC
TGCATGCTGT TCGCCGCGCT GTCCGGCTCG TCGCCGGCGA CGGTGGCGGC GGTCGGTTCG
ATCGCCGTGG CCGGCATGGT GCGCTCCGGC TATCCGCGCG CCTTCGGCGC AGGGATCATC
TGCAACGCCG GGACCCTGGG CATCCTCATC CCGCCATCGA TCGTGATGGT GGTCTACGCC
GCCGCCACCG AGACCTCGGT GGGCAAGCTG TTCGTCGCCG GGGTGGTTCC GGGGCTGCTG
CTCGGGGTGA TCCTGATGGT GGTGATCTAC ATCGTCGCGC GGGTCAAGAA GCTGCCGGCG
CAGCCGCGCG CCAGTTTCCG CGAGTGGCTG GCCGCCGCGC GCCGCGCCGG CTGGGGCCTG
TTGCTGCTGG TGATCATCCT CGGCGGCATC TACTCCGGGC TGTTCACCCC CACCGAGGCG
GCGGCGGTGG CGGCGGTGTA TTCGGCCTTC GTCGCGCTGT TCGTGTACAA GGACATGCGC
CTGCGCGACT GTCCCAAGGT GCTGCTGGAG TCGGGGCGGC TGAGCATCAT GCTGATGTTC
ATCATCGCCA ACGCCATGCT CTTCGCCCAT GTGTTGACCA CCGAGCAGAT CCCCCAGCAG
ATCACCGAAT GGGTGGTGCA GGAAGGCCTG ACCCCGATCG GCTTCCTGCT GATGGTCAAC
GTGGTCCTGC TGGTCGCCGG CAGCTTCATG GAGCCCTCGG CGATCGTGCT GATCCTGGCG
CCGATCTTCT TCCCCATCGC CATGAAGCTG GGCATCGACC CGATCCACCT GGGCATCGTC
ATGGTGGTGA ACATGGAGAT CGGCCTGGTG CACCCGCCGG TGGGCCTCAA CCTGTTCGTC
ACCTCGGCGG TCACCGGTAT GCCGCTGGGC GCGACCATCC GCGCGGCGCT GCCGTGGCTG
ATGATCCTGC TGCTGTTCCT GCTCCTGGTG ACCTACGTGC CGCTGATCTC GCTGTGGCTG
CCCGGCCTGC TGGGCATGAG CTGA
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| Protein sequence | MTVLILFLLL FLFMFIGVPI AISLGLSGAL TILLFSPDSV RSLAIKLFET SEAYTLLAIP
FFLLSGAFMT TGGVARRLID FANACVGHIR GGLAIAAVLA CMLFAALSGS SPATVAAVGS
IAVAGMVRSG YPRAFGAGII CNAGTLGILI PPSIVMVVYA AATETSVGKL FVAGVVPGLL
LGVILMVVIY IVARVKKLPA QPRASFREWL AAARRAGWGL LLLVIILGGI YSGLFTPTEA
AAVAAVYSAF VALFVYKDMR LRDCPKVLLE SGRLSIMLMF IIANAMLFAH VLTTEQIPQQ
ITEWVVQEGL TPIGFLLMVN VVLLVAGSFM EPSAIVLILA PIFFPIAMKL GIDPIHLGIV
MVVNMEIGLV HPPVGLNLFV TSAVTGMPLG ATIRAALPWL MILLLFLLLV TYVPLISLWL
PGLLGMS
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