Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4596 |
Symbol | rimO |
ID | 5354140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4719984 |
End bp | 4721306 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640813643 |
Product | ribosomal protein S12 methylthiotransferase |
Protein accession | YP_001349943 |
Protein GI | 152988570 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCC CCACTCCCAA AGTCGGTTTC GTCAGCCTTG GCTGCCCCAA GGCGCTGGTC GACTCCGAGC GCATCCTCAC CCAGCTGCGC ATGGAAGGTT ATGAGGTCGT CCCGACCTAC GAGGACGCCG ACGTCGTGGT GGTCAACACC TGCGGTTTCA TCGACAGCGC CAAGGCCGAG TCCCTGGAAG TGATCGGCGA AGCCATCGCC GAGAACGGCA AGGTCATCGT CACCGGCTGC ATGGGCGTGG AAGAACACGC GATCCGCGAC GTGCATCCCA GCGTGCTGGC GGTCACCGGC CCGCAACAAT ACGAGCAGGT GGTCACCGCG GTGCACGAAG TGGTACCGCC GAAGACCGAG CACAACCCGC TGATCGACCT GGTACCGCCG CAGGGAATCA AGCTGACCCC GCGCCACTAC GCCTACCTGA AGATTTCCGA AGGCTGCAAC CACAGTTGCA GCTTCTGCAT CATCCCGTCG ATGCGCGGCA AGCTGGTCAG CCGCCCGGTC GGCGACGTGC TGAGCGAGGC CGAGCGCCTG GTCAAGGCCG GGGTCAAGGA GCTCCTGGTG ATTTCCCAGG ACACCAGCGC CTATGGCGTC GACCTGAAGT ACAAGACCGA CTTCTGGAAC GGCCAGCCGG TCAAGACCCG CATGAAGGAG CTCTGCGAGG CGCTCGGCGG CATGGGCGTG TGGGTGCGCC TGCACTACGT CTATCCGTAC CCGAACGTCG ACGACGTGAT CCCGCTGATG GCCGCCGGCA AGCTCCTGCC GTATCTCGAC ATCCCCTTCC AGCACGCCAG CCCGAAGGTG CTCAAGGCCA TGAAGCGCCC GGCCTTCGAG GACAAGACCC TGGCCCGGTT CAAGCACTGG CGCGAAATCT GCCCGGAACT GACCATCCGC TCGACCTTCA TCGTCGGCTT CCCCGGCGAG ACCGAGGAAG ACTTCCAGTA CCTGCTCGAC TGGCTCACCG AAGCCCAGCT CGATCGCGTC GGCTGCTTCC AGTACTCCCC GGTGGAAGGC GCCCCGGCCA ACGAACTTGG CCTGGAGCCG GTGCCGGACG AAGTCAAGCA GGACCGCTGG GAGCGCTTCA TGGCCCACCA GCAGGCGATC TCCGCGGCTC GCCTGCAACT CAAGGTCGGC AAGGAAATCG AAGTGCTGAT CGACGAAGTC GACGAGCAGG GCGCGGTCGG CCGCTCCTGG GCCGACGCTC CGGAAATCGA CGGCAACGTG TTCGTCGACA GCGACGCGCT GAAGCCGGGC GACAAGGTCC GCGTGCGCAT CACCGATGCC GACGAATACG ACCTCTGGGC CGAGCCGGTC TGA
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Protein sequence | MSTPTPKVGF VSLGCPKALV DSERILTQLR MEGYEVVPTY EDADVVVVNT CGFIDSAKAE SLEVIGEAIA ENGKVIVTGC MGVEEHAIRD VHPSVLAVTG PQQYEQVVTA VHEVVPPKTE HNPLIDLVPP QGIKLTPRHY AYLKISEGCN HSCSFCIIPS MRGKLVSRPV GDVLSEAERL VKAGVKELLV ISQDTSAYGV DLKYKTDFWN GQPVKTRMKE LCEALGGMGV WVRLHYVYPY PNVDDVIPLM AAGKLLPYLD IPFQHASPKV LKAMKRPAFE DKTLARFKHW REICPELTIR STFIVGFPGE TEEDFQYLLD WLTEAQLDRV GCFQYSPVEG APANELGLEP VPDEVKQDRW ERFMAHQQAI SAARLQLKVG KEIEVLIDEV DEQGAVGRSW ADAPEIDGNV FVDSDALKPG DKVRVRITDA DEYDLWAEPV
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