Gene PSPA7_4596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_4596 
SymbolrimO 
ID5354140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp4719984 
End bp4721306 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID640813643 
Productribosomal protein S12 methylthiotransferase 
Protein accessionYP_001349943 
Protein GI152988570 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACCC CCACTCCCAA AGTCGGTTTC GTCAGCCTTG GCTGCCCCAA GGCGCTGGTC 
GACTCCGAGC GCATCCTCAC CCAGCTGCGC ATGGAAGGTT ATGAGGTCGT CCCGACCTAC
GAGGACGCCG ACGTCGTGGT GGTCAACACC TGCGGTTTCA TCGACAGCGC CAAGGCCGAG
TCCCTGGAAG TGATCGGCGA AGCCATCGCC GAGAACGGCA AGGTCATCGT CACCGGCTGC
ATGGGCGTGG AAGAACACGC GATCCGCGAC GTGCATCCCA GCGTGCTGGC GGTCACCGGC
CCGCAACAAT ACGAGCAGGT GGTCACCGCG GTGCACGAAG TGGTACCGCC GAAGACCGAG
CACAACCCGC TGATCGACCT GGTACCGCCG CAGGGAATCA AGCTGACCCC GCGCCACTAC
GCCTACCTGA AGATTTCCGA AGGCTGCAAC CACAGTTGCA GCTTCTGCAT CATCCCGTCG
ATGCGCGGCA AGCTGGTCAG CCGCCCGGTC GGCGACGTGC TGAGCGAGGC CGAGCGCCTG
GTCAAGGCCG GGGTCAAGGA GCTCCTGGTG ATTTCCCAGG ACACCAGCGC CTATGGCGTC
GACCTGAAGT ACAAGACCGA CTTCTGGAAC GGCCAGCCGG TCAAGACCCG CATGAAGGAG
CTCTGCGAGG CGCTCGGCGG CATGGGCGTG TGGGTGCGCC TGCACTACGT CTATCCGTAC
CCGAACGTCG ACGACGTGAT CCCGCTGATG GCCGCCGGCA AGCTCCTGCC GTATCTCGAC
ATCCCCTTCC AGCACGCCAG CCCGAAGGTG CTCAAGGCCA TGAAGCGCCC GGCCTTCGAG
GACAAGACCC TGGCCCGGTT CAAGCACTGG CGCGAAATCT GCCCGGAACT GACCATCCGC
TCGACCTTCA TCGTCGGCTT CCCCGGCGAG ACCGAGGAAG ACTTCCAGTA CCTGCTCGAC
TGGCTCACCG AAGCCCAGCT CGATCGCGTC GGCTGCTTCC AGTACTCCCC GGTGGAAGGC
GCCCCGGCCA ACGAACTTGG CCTGGAGCCG GTGCCGGACG AAGTCAAGCA GGACCGCTGG
GAGCGCTTCA TGGCCCACCA GCAGGCGATC TCCGCGGCTC GCCTGCAACT CAAGGTCGGC
AAGGAAATCG AAGTGCTGAT CGACGAAGTC GACGAGCAGG GCGCGGTCGG CCGCTCCTGG
GCCGACGCTC CGGAAATCGA CGGCAACGTG TTCGTCGACA GCGACGCGCT GAAGCCGGGC
GACAAGGTCC GCGTGCGCAT CACCGATGCC GACGAATACG ACCTCTGGGC CGAGCCGGTC
TGA
 
Protein sequence
MSTPTPKVGF VSLGCPKALV DSERILTQLR MEGYEVVPTY EDADVVVVNT CGFIDSAKAE 
SLEVIGEAIA ENGKVIVTGC MGVEEHAIRD VHPSVLAVTG PQQYEQVVTA VHEVVPPKTE
HNPLIDLVPP QGIKLTPRHY AYLKISEGCN HSCSFCIIPS MRGKLVSRPV GDVLSEAERL
VKAGVKELLV ISQDTSAYGV DLKYKTDFWN GQPVKTRMKE LCEALGGMGV WVRLHYVYPY
PNVDDVIPLM AAGKLLPYLD IPFQHASPKV LKAMKRPAFE DKTLARFKHW REICPELTIR
STFIVGFPGE TEEDFQYLLD WLTEAQLDRV GCFQYSPVEG APANELGLEP VPDEVKQDRW
ERFMAHQQAI SAARLQLKVG KEIEVLIDEV DEQGAVGRSW ADAPEIDGNV FVDSDALKPG
DKVRVRITDA DEYDLWAEPV