| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4577 |
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| Symbol | rumA |
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| ID | 5359334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4696779 |
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| End bp | 4698137 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640813624 |
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| Product | 23S rRNA 5-methyluridine methyltransferase |
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| Protein accession | YP_001349925 |
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| Protein GI | 152984405 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATGG CGAGAAATAA AGGCGGCCTG CGTTTCCAGC CCAGTGGCGG CGCGCGTGGT
CCCGCGGTTC CAGTCGGCAA GAAGCAGCGT CTGCGGATCG AACGCCTGGC CCATGACGGG
CGTGGCATAG CCCATGAGGC CGGGATGACC TGGTTCGTCA GCGGCGGCTT GCCCGGCGAA
GAGCTGGAGG CCCGGGTACT CGGCGCGCGC AGCAAGGTGG TGGAGGCGCG CAGCGAACGT
CTGTTCGGCA GCAGCGAACT GCGCCGCCGG GAGCCGTGCT CCGTTGCCGG GCGTTGTGGC
GGTTGCACCC TGCAGCACCT TGGTCACGCG GAACAGTTGG CGCTGAAGCA GCGCACCCTG
CAGGAACAGT TGCAGCGTTT CGCCGGCATG GAGCCGGAGG AGTGGGCGCC GCCGTTGGTC
GGGCCCGAGT TCGGCTATCG CCGCCGCGCG CGTATCGCCG TGCGCTGGGA GCCGAAGTCG
CGGCGCCTGG AGGTCGGCTT CCGGGCATCC TCCAGCCAGG AGATCGTCGC CTTCGATGAA
TGCCTGGTGC TGGTGCCTGC ATTGCAAACG ATTGCCCAGG CTCTGCCGGC GCTGCTGCAG
GGCTTTTGCA AGCCGGAAGC CATCGGCCAC GTCGAACTCT TCCATGGCAC GGCCAGTGCA
TTGTTGCTGC GTCATACGGT GGCCCTCGCC GTCGAGGACC GCCGGCGCCT GGAGGATTTC
TGCGCCGAGC ACCAGGCCCA GCTCTGGCTG CAGGGGGCGG ACGAACCCAG GCCGGTAGAG
CCTGCGGCCG AACTGGGCTA TGCCCTGGAT GACTGGAAAC TGACGCTGGC CTATCGGCCG
GGCGATTTCG TTCAGGTCAA CGCGCCGGTC AACCGGCTGA TGGTCCGCCA GGCGTTGGAA
TGGCTGGCGC CGGGGGCCGA GGAACGGGTT CTCGACCTGT TCTGCGGGCT GGGCAATTTC
TCCCTGCCGC TGGCGCGCCA GGTGGCGCAG GTGGTCGGGG TGGAGGGCGT GGCGGCGATG
GTCGGGCGGG CAAGCGCCAA CGCGCTGGCC AATGGCCTGG ACAACGCGCA TTTTTTCCAG
GCCGATCTGT CCAAAGCGCT TGCCGAAGCG CCCTGGGCGG CGCAAGGTTT TACCGCCGTA
CTGCTCGATC CGCCACGCGA TGGCGCGTTG GAGGCGGTAC GGGGAATGAG TTCCCTGGGT
GCCCGCCGGG TAGTCTATGT ATCCTGCAAT CCGGCGACCC TGGCGCGCGA CGCTGGCGAA
ATGGCCAGGC AGGGCTATCG TCTGAAGCGC GCCGGAATCC TCGACATGTT CCCGCAGACG
GCGCATGTCG AGGCCATGGC TTTGTTCGAG GCAGGCTAG
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| Protein sequence | MSMARNKGGL RFQPSGGARG PAVPVGKKQR LRIERLAHDG RGIAHEAGMT WFVSGGLPGE
ELEARVLGAR SKVVEARSER LFGSSELRRR EPCSVAGRCG GCTLQHLGHA EQLALKQRTL
QEQLQRFAGM EPEEWAPPLV GPEFGYRRRA RIAVRWEPKS RRLEVGFRAS SSQEIVAFDE
CLVLVPALQT IAQALPALLQ GFCKPEAIGH VELFHGTASA LLLRHTVALA VEDRRRLEDF
CAEHQAQLWL QGADEPRPVE PAAELGYALD DWKLTLAYRP GDFVQVNAPV NRLMVRQALE
WLAPGAEERV LDLFCGLGNF SLPLARQVAQ VVGVEGVAAM VGRASANALA NGLDNAHFFQ
ADLSKALAEA PWAAQGFTAV LLDPPRDGAL EAVRGMSSLG ARRVVYVSCN PATLARDAGE
MARQGYRLKR AGILDMFPQT AHVEAMALFE AG
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