Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4558 |
Symbol | |
ID | 5356869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4680813 |
End bp | 4682048 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640813606 |
Product | ribonuclease |
Protein accession | YP_001349907 |
Protein GI | 152987671 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.176119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGAAC ACTTTAACGA CGGGATCGAA TTCGCTCGCT TCCTCGCCCA TCGCTTCGTC ACCGACAAGG CCCCCAACAG CGCGGCGGCG CTGACCTACA CCACGCTGTT CGCGGTGGTG CCGATGATGA CGGTGATGTT TTCCATGCTC TCGCTGATCC CGGCTTTCCA TGGCATGGGG GAGTCGATCC AGACTTTCAT CTTCCGTAAT TTCGTGCCTT CCGCCGGAGA GGCGGTGGAG ACCTACCTGA AGAGTTTCAC CACCCAGGCG CGCCATCTCA CCTGGGTCGG CGTGGTGTTC CTGGCGGTCA CCGCCTTCAC CATGCTGGTG ACCATCGAGA AAGCCTTCAA CGAGATCTGG CGGGTACGCC AGCCGCGCCG CGGCGTCGGA CGCTTCCTGC TCTACTGGGC GATCCTCAGC CTGGGTCCCT TGCTGCTGGG GGCCGGCTTC GCCGTGACCA CCTATATCAC TTCGCTGTCG CTGCTCCACG GGCCGGATGC CCTGCCGGGC GCGGAAACGC TGCTGGGGCT GATGCCGCTG GCGTTCAGCG TGGCGGCCTT CACCCTGCTC TATTCGGCGG TGCCCAACGC CCGGGTTCCC GTTCGCCATG CGTTGATGGG TGGAATGTTC ACCGCCGTGC TGTTCGAGGC CGCCAAGACC CTGTTCGGCC TCTATGTCAG CCTGTTTCCC GGTTACCAGT TGATCTACGG GGCCTTTGCC ACCGTGCCGA TCTTCCTGCT GTGGATCTAT CTCTCCTGGA TGATCGTCCT GTTCGGCGCC GTATTGGTCT GCAATCTGTC TTCCTCGCGT CTCTGGCGAC GCCGCTCGCT ACCCAAGCCG ATCGTCCTGC TCGGCGTGCT GAGAGTCTTC CATCAGCGCC AGCAACTCGG CCAGTCGATG CGCCTCGTCC ACCTGCACCG TGCCGGCTGG CTATTGCCCG AGGACGAATG GGAGGAGTTG CTGGATTTCC TCGAGAAGGA ACAGTTCGTT TGCCGGGTAG GTGGAGGCGA ATGGGTGTTG TGCCGGGATC TTGGCAGTTA CAGCCTGCAC CGCCTGCTCA ATCGCTGTCC ATGGCCGATG CCGAGCCGGG AACGCATGCC GGCGCAACTG GACGAGGCGT GGTATCCGGC GTTCCAGCAG GCGATGGAGC GCTTGCAGGC GGAGCAGGAA AGGCTGTTCG GGGAAAGCCT GGCGCACTGG CTGGCGGAGG GGAATGCCTC AGCGAAGGTG ACGTAA
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Protein sequence | MREHFNDGIE FARFLAHRFV TDKAPNSAAA LTYTTLFAVV PMMTVMFSML SLIPAFHGMG ESIQTFIFRN FVPSAGEAVE TYLKSFTTQA RHLTWVGVVF LAVTAFTMLV TIEKAFNEIW RVRQPRRGVG RFLLYWAILS LGPLLLGAGF AVTTYITSLS LLHGPDALPG AETLLGLMPL AFSVAAFTLL YSAVPNARVP VRHALMGGMF TAVLFEAAKT LFGLYVSLFP GYQLIYGAFA TVPIFLLWIY LSWMIVLFGA VLVCNLSSSR LWRRRSLPKP IVLLGVLRVF HQRQQLGQSM RLVHLHRAGW LLPEDEWEEL LDFLEKEQFV CRVGGGEWVL CRDLGSYSLH RLLNRCPWPM PSRERMPAQL DEAWYPAFQQ AMERLQAEQE RLFGESLAHW LAEGNASAKV T
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