| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4550 |
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| Symbol | oprD |
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| ID | 5358647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4674381 |
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| End bp | 4675706 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640813598 |
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| Product | basic amino acid/basic peptide/imipenem outer membrane porin OprD |
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| Protein accession | YP_001349899 |
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| Protein GI | 152988809 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.770883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGA TGAAGTGGAG CGCCATTGCA CTGGCGGTTT CCGCGGGTAG CACTCAGTTC
GCCGTGGCCG ACGCCTTCGT CAGCGATCAG GCCGAAGCGA AGGGGTTCAT CGAAGACAGC
AGTCTCGACC TGCTGCTCCG CAACTACTAT TTCAACCGCG ACGGCAAGAG CGGCAGCCGG
GACCGTGTCG ACTGGACCCA GGGCTTCCTC ACCACCTACG AATCCGGCTT CACCCAAGGC
ACCGTCGGCT TCGGCGTGGA TGCCTTCGGC TACCTCGGCC TGAAACTCGA CGGCACCTCC
GACAAGACCG GCACCGGCAA CCTGCCGGTA ATGAACGATG GCAAGCCGCG CGATGACTAC
AGCCGCGCAG GCGGCGCCCT GAAGGTACGC ATTTCCAAGA CCATGCTGAA ATGGGGCGAG
ATGCAGCCGA CCGCACCGGT CTTCGCCGCC GGCGGCAGCC GCCTGTTCCC GCAGACCGCG
ACCGGCTTCC AGTTGCAGAG CAGCGAGTTC GAAGGCCTCG ACCTCGAAGC GGGCCATTTC
ACCGAAGGCA AGCAGGGCAC CACCACCAAG TCGCGCGGCG AACTCTACGC GACCTATGCG
GGCCAGACCG CCAAGAGCGC GGACTTCGCC GGCGGCCGCT ACGCGATCAC CGACAACCTC
AGCGCCTCCC TGTATGGCGC CGAACTGAAA GACATCTATC GCCAGTACTA CCTGAACACC
AACTACACCA TTCCGCTGGC GGAAGATCAG TCGCTGGGCT TCGACTTCAA CATCTACCGC
ACCACCGACG AAGGCAAGTC CAAGGCCGGC GACATCAGCA ACACCACCTG GTCCCTGGCC
GGCGCGTACA CCCTGGACGC ACACACCTTC ACCCTCGCCT ACCAGCAGGT CCATGGCGAC
GAGCCGTTCG ATTACATCGG CTTCGGCGAG AACAATTCCG GCGGTGGCGG CGACTCGATC
TTCCTCGCCA ACTCCATCCA GTACTCCGAC TTCAACGGCC CCGGCGAGAA ATCCTGGCAG
GCCCGCTACG ACCTGAACAT GGCTTCGTAC GGCGTACCCG GCCTGACCTT CATGGTCCGC
TACATCAACG GCAAGGACAT CGACGGCACC AAGGTCGACT CCAGCTCCGC CTACGCCGGC
CTGTATGGCG AAGACGGCAA GCACCACGAG ACCAACTTCG AAGCCAAGTA CGTGGTCCAG
TCCGGCCCCG CCAAGGACCT GTCGTTCCGC ATCCGCCAGG CCTGGCACCG CGCCAACGCC
GACCAGGGCG AAGGCGACCA GGACGAGTTC CGCCTGATCG TCGACTATCC GCTGTCGATC
CTGTAA
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| Protein sequence | MKVMKWSAIA LAVSAGSTQF AVADAFVSDQ AEAKGFIEDS SLDLLLRNYY FNRDGKSGSR
DRVDWTQGFL TTYESGFTQG TVGFGVDAFG YLGLKLDGTS DKTGTGNLPV MNDGKPRDDY
SRAGGALKVR ISKTMLKWGE MQPTAPVFAA GGSRLFPQTA TGFQLQSSEF EGLDLEAGHF
TEGKQGTTTK SRGELYATYA GQTAKSADFA GGRYAITDNL SASLYGAELK DIYRQYYLNT
NYTIPLAEDQ SLGFDFNIYR TTDEGKSKAG DISNTTWSLA GAYTLDAHTF TLAYQQVHGD
EPFDYIGFGE NNSGGGGDSI FLANSIQYSD FNGPGEKSWQ ARYDLNMASY GVPGLTFMVR
YINGKDIDGT KVDSSSAYAG LYGEDGKHHE TNFEAKYVVQ SGPAKDLSFR IRQAWHRANA
DQGEGDQDEF RLIVDYPLSI L
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