| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4501 |
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| Symbol | |
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| ID | 5357367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4629139 |
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| End bp | 4631370 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640813549 |
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| Product | TraG/TraD family protein |
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| Protein accession | YP_001349851 |
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| Protein GI | 152985999 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCC AGTACCCGCT GGAAGCGCTC TTGCGGCCTG CCGTGGAGCT CTACACCACC
ACCGTGTGCT TCACCGCGGC CGCGCTCTGC ATCGTCGCGC CGTGGACGTT CGCCCTCACT
CCGCTGTTCG GCATCGTGGC CGCACTGGGC TTCGCCTGGC TGGGTATCGT GCGGCTGAAG
CAGGCCGGCG TGGTGCTCCG CTACCGGCGG AACATCCGCC GACTGCCGAA GTACACGATG
ACCAGTGCCG AAATGCCGGT CAGCAACGAA CACTTGTTCA TCGGTAAAGG ATTTCGCTGG
ACGCAGAAGC ATACGCAGCG CCTGGCAGAT ACCTACCTGC CCCAGTTCGC CTCCTACGTC
GAGCCCTCGC CGCTCTACGA GCGCGCGCGC CGGCTGGAGA AGCAGCTTGA GTTCGCCCCC
TTCCCCCTCA AGCTGGTCGC CAAAGCCACT GCCTGGGACG TGGCCTGGAA CCCCGCACGG
CCGCTGCCGC CCGTGGGCGG TTTGCCTCGG CTCCATGGCA TCGAGCCGCG CGAACAGGAC
GTAGGCCTGC AACTGGGCGA GCGCGTCGGC CACACACTGG TACTCGGCAC CACGCGGGTG
GGTAAGACGC GACTCGCGGA GCTGTTCATC ACCCAGGATA TTCGCCGCAC CCACTGCCGA
GGCCGACGCC AGCGAGTGAA GATGGGCCGG CGGACCCAGA CGGTTCACCA CGGCTATCGG
CGCCAGCGCG CAGAGGAGCA GCCGGACTAC GAGGTGGTGA TCGTCTTCGA CCCGAAAGGC
GACGCTGACT TGCTGAAGCG TATGTACGTG GAATGCGAAC GTGCCGGCCG CCTGGACGAG
TTCTACGTGT TCCACCTCGG TCATCCTGAC CTGTCGGCAC GCTACAACGC CGTCGGCCGG
TTCGGTCGGA TCTCCGAGGT CGCCACACGC GTCGCCGGCC AGCTCTCCGG CGAGGGCAAC
AGCGCGGCGT TCCGCGAGTT CGCCTGGCGG TTCGTCAACA TCATCGCCCG CGCGCTGCAC
GCGCTGGGTA TCCGGCCTGA CTACCAGCAG ATCCTCCGGC ACGTCGTGAA CATCGATGCG
TTGTTCGTCG AATATGCGCA GAAATACATC AGCGAGCACG ATCCCAGGGC CTGGGACACC
ATCATCCAGA TCGAGGGCAA GCTCAACGAC AAGAACATCC CGTTCAACAT GAAAGGACGG
CCCCTGCGGG TCGTAGCCAT CGACCAGTAC CTGACACAGA AACGCATCGC CGACCCGGTC
ATGGAAGGCC TGAAGAGCGC CGTGCGCTAC GACAAGACCT ACTTCGACAA GATCGTGGCC
TCGCTGCTGC CGCTACTGGA GAAACTCACT ACCGGGCGGA TCTCGGAGCT TCTTTCGCCC
AACTACGCGG ACCTCAACGA TCCGCGACCG ATCTTCGACT GGATGCAGGT CATCCGCAAG
CGCGCCGTGG TCTACGTCGG CCTCGACGCA CTATCGGATA CCGAGGTCGC CGCCGCGGTG
GGCAACTCCA TGTTCAGCGA CCTGGTCTCG GTGGCGGGTC ACATCTACAA GCATGGAGTC
GATGACGGCC TGCCCGGCTC ACTCGCCGGC GGCAAGGTCC GCATCAACCT GCATGCCGAC
GAGTTCAACG AGCTGATTGG CGACGAGTTC ATCCCCATGG TCAACAAAGC GGGCGGCGCC
GGTGTGCAAG TGACGGCCTA CACCCAGACC ATGAGCGACA TCGAGGCCAA GATCGGCTCC
CGCGCGAAGG CCGGTCAGAT CATCGGCAAC TTCAACAACC TGTTCATGCT GCGGGTGCGC
GAGACCGCCA CGGCCGAACT TCTGACCAAC CAGCTCCCCA AAGTCCAGAT CTACACCAGC
ACGCCAGCGA GCGGCGCCAA CGACGCGATC AACAACAAGA AGGCAGCCTT CACCTCCAGC
TCGCACGACC AGGTGCAGAT GACCAGCGTG CCGATGCTCG AGCCGGCCCA CATCGTTGGT
CTGCCCAAAG GACAAGCGTT CGCGCTACTC GAGGGCGGCA ATCTCTGGAA GATCCGAATG
CCGCTGCCGG CGGTCGATCC CGACGAGGTG ATGCCGAAAA GCCTGCAGGA GCTGGCTGCC
GGTATGCGCA AGGGCCAGGC CGCAAACAGC GAGTGGTGGG AGGCACCGGG ATACTCCGCC
CTGCAGGATG GTCTGCCCCA GGACCTGGTC GACGATTTCC GTCACCTCGG CGCCGGTGAG
GATGCCGCCT GA
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| Protein sequence | MAGQYPLEAL LRPAVELYTT TVCFTAAALC IVAPWTFALT PLFGIVAALG FAWLGIVRLK
QAGVVLRYRR NIRRLPKYTM TSAEMPVSNE HLFIGKGFRW TQKHTQRLAD TYLPQFASYV
EPSPLYERAR RLEKQLEFAP FPLKLVAKAT AWDVAWNPAR PLPPVGGLPR LHGIEPREQD
VGLQLGERVG HTLVLGTTRV GKTRLAELFI TQDIRRTHCR GRRQRVKMGR RTQTVHHGYR
RQRAEEQPDY EVVIVFDPKG DADLLKRMYV ECERAGRLDE FYVFHLGHPD LSARYNAVGR
FGRISEVATR VAGQLSGEGN SAAFREFAWR FVNIIARALH ALGIRPDYQQ ILRHVVNIDA
LFVEYAQKYI SEHDPRAWDT IIQIEGKLND KNIPFNMKGR PLRVVAIDQY LTQKRIADPV
MEGLKSAVRY DKTYFDKIVA SLLPLLEKLT TGRISELLSP NYADLNDPRP IFDWMQVIRK
RAVVYVGLDA LSDTEVAAAV GNSMFSDLVS VAGHIYKHGV DDGLPGSLAG GKVRINLHAD
EFNELIGDEF IPMVNKAGGA GVQVTAYTQT MSDIEAKIGS RAKAGQIIGN FNNLFMLRVR
ETATAELLTN QLPKVQIYTS TPASGANDAI NNKKAAFTSS SHDQVQMTSV PMLEPAHIVG
LPKGQAFALL EGGNLWKIRM PLPAVDPDEV MPKSLQELAA GMRKGQAANS EWWEAPGYSA
LQDGLPQDLV DDFRHLGAGE DAA
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