| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4479 |
|---|
| Symbol | |
|---|
| ID | 5358115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4613274 |
|---|
| End bp | 4613711 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640813527 |
|---|
| Product | type IV B pilus protein |
|---|
| Protein accession | YP_001349829 |
|---|
| Protein GI | 152987877 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGC TCTGGATTGC CCTATTGCTC ACCCTGCTCA CCGGAACCTG GCTGAGTGTA
CAAAGCGACC ACGCGACCTC GAGCGCCGAA CTGGCCGAGG TCGATACCCT GGCCAGGAGC
TTGCTGCTCT ACCGCTCCAG GCTGGCGGAG TACGCACACG CCAACCCCGG TTTCAGCGGT
TCGCCGGCGG ACTCCGCTCT TGGTTTACCG GCCTGGTTCC GCAAGCCAGC GCGGCTTCAG
GGCTACATCG CCGCCGACAC CAGCTACGCC TTCATCGCCT CGCCGCCGGC AGGGCTGGCG
GCAGCCGTGG ATGCCGGTAC GGAATCCGAC CTAGTTGGTG TCAGGCGCAA CGGCCAGTTA
GTCACGCGCC GCCTCGGAGC CACTGCCATT GCGCTCCCTG CGCCCATCCC CGAGGGCGCG
GTGGTCGCGG TCAAATAA
|
|---|
| Protein sequence | MPLLWIALLL TLLTGTWLSV QSDHATSSAE LAEVDTLARS LLLYRSRLAE YAHANPGFSG
SPADSALGLP AWFRKPARLQ GYIAADTSYA FIASPPAGLA AAVDAGTESD LVGVRRNGQL
VTRRLGATAI ALPAPIPEGA VVAVK
|
|---|
| |