| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4471 |
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| Symbol | |
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| ID | 5358876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4604150 |
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| End bp | 4605859 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640813519 |
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| Product | type IVB pilus formation outer membrane protein |
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| Protein accession | YP_001349821 |
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| Protein GI | 152986390 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCCC CCCTGAAGAA CCTCTTGCCT TGCCTCCTGA TCCCCGCGCT GGCCAGTTGC
TCGGTCGCAC GGGTGAACGA GTCGGCGGAT CGTGTCGAAG CTACGGCAGA TTCCGCGTCG
ACGATCGCAG CACAGATGCG CAACACCCGA CCGGATCGCC GCGATACGGT GGTGTTCTCC
GACAAACCCT GGGTCAGCAC GAAGCCCCTG AGCGTTTCGC ACACCTTGTC CAGTGACTGC
ATCGTGACGT GGCGCCCTGC AGGCGCAGCG TCGCTGCAGG AGGCCGCCCA GGAAGTCATC
AACCAATGCC ACCTGGCGGT CAGTATCACG CCCGACGCGC TGAACCCGGC CGCTTTTGCC
CTGCAACCTC AGCAGCGCGC GAGCAACGCC CCGCCGCCCA TCCAAGGCGG CCAGGACATG
GCCACCATGC TGTTTCCTGC CTCCGTCGCC AACGGCATGT CCCTAGGTGC CGGCGGCAGC
ATGGGATCGA GCTTCGGGTC CTACGGCCCG CGGTCGCTGT ACAACATCAA ATGGAACGGC
AAGGTCAGCG GGTTCCTCGA TCTCATCGCC GCCCGCGCCG GCGTGTCCTG GCGCTACAAC
CCAACCGAGA AACGGGTCGA GTTCTACTAC CTGGACACTC GGACCTTCCG CATCTACGCC
TTCGACGACG TCAACACGGT GGACTCCACC GTGCGTTCCG GTATGACGAC GGCCGCCGGC
ATCAGCGGGG ACGGCTCCGG ATCCACTGGA CAGAATGGCA GCTCCGGCAT CAGCGGCGAC
TCCGGCAGCA AGCAGACCAC CAGCTCCGAG CTGAAGACCT CGATCCTCAG CGACATAGAG
AACAGCATCA ACTCGATGCT GACGCCGAGC ATGGGACGCA TGTCGCTGTC GCGTGCCACG
GGCACCCTGA CCGTCACCGA CCGACCAGAG GTCCTCAACC GCGTCCAGCA GTTGGTCAAC
CGGGAGAACG AGAGCATCAC CAAGCAGGTG CTGCTGAACG TCAACGTGCT CTCGGTCGCC
CTGACCGACA AGGATCAACT GGGGATCGAC TGGAACCTGG TCTACAAGTC GCTCAACAAC
AAGTGGGGCA TCGGCCTGAA GAACACCATG CCAGGCATCG ATCAAAGCGC GATCTCCGGC
TCCGTGAGCA TCCTGGATAC CGCCAACAGT GCCTGGGCAG GATCCAAGGC CATGGTCCAG
GCGCTGGCCC AGCAGGGTCG CGTCTCGACC GTCCGCTCCC CGTCCGTGAC CACGCTCAAC
CTCCAGTCGG CGCCGATCCA GATCGGCCGC TACGACAGCT ACCTGGCCTC CAGCCAGATC
TCCAACGTCG CCCAGGTCGG CAGTACCACC TCGCTGATCC CGGGCGCCGT GACCAGCGGC
TACAACATGA GCCTGCTGCC GTTCGTGATG GAAAGCGGCG AGATGCTGCT GAAGATCAAC
ATCAACATGA CCTCCAGACC GACGTTCGAA ATGCAGACCA GCGGGGACTC CAAAGCCCAG
TTCCCGAGCT ACGACATACA ACTGTTCGAC CAGAAGGTAC GCCTGCGCAG CGGCGAGACC
TTGGTGCTCT CCGGCTTCGA CCAGACCACC GAGGATACCA ACAAGGTCGG CACCGGCGAC
GCCGGATTCT TCGGCCTTGG CGGCGGGCTG ACCCGCAATA CCAAACGCGA GGTCATCGTG
GTGCTGATCA CCCCCGTCGT GCTGGGCTGA
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| Protein sequence | MRAPLKNLLP CLLIPALASC SVARVNESAD RVEATADSAS TIAAQMRNTR PDRRDTVVFS
DKPWVSTKPL SVSHTLSSDC IVTWRPAGAA SLQEAAQEVI NQCHLAVSIT PDALNPAAFA
LQPQQRASNA PPPIQGGQDM ATMLFPASVA NGMSLGAGGS MGSSFGSYGP RSLYNIKWNG
KVSGFLDLIA ARAGVSWRYN PTEKRVEFYY LDTRTFRIYA FDDVNTVDST VRSGMTTAAG
ISGDGSGSTG QNGSSGISGD SGSKQTTSSE LKTSILSDIE NSINSMLTPS MGRMSLSRAT
GTLTVTDRPE VLNRVQQLVN RENESITKQV LLNVNVLSVA LTDKDQLGID WNLVYKSLNN
KWGIGLKNTM PGIDQSAISG SVSILDTANS AWAGSKAMVQ ALAQQGRVST VRSPSVTTLN
LQSAPIQIGR YDSYLASSQI SNVAQVGSTT SLIPGAVTSG YNMSLLPFVM ESGEMLLKIN
INMTSRPTFE MQTSGDSKAQ FPSYDIQLFD QKVRLRSGET LVLSGFDQTT EDTNKVGTGD
AGFFGLGGGL TRNTKREVIV VLITPVVLG
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