| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4408 |
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| Symbol | |
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| ID | 5356140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4538380 |
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| End bp | 4538991 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640813456 |
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| Product | fimbrial subunit CupC1 |
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| Protein accession | YP_001349759 |
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| Protein GI | 152988191 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.696619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCATTT CCATGAAAAG TCTTCTGGCT GCCGCAGTAG CCAGCCTGGT CGTCGGTAAC
GCCATGGCTG CAGACGGCAC CATCAACTTC ACCGGCAACA TTACTGCTGC ATCCTGCAAT
ATCACCGGCG GCGCCGGCAC CGGTGTTACC GGTGAGAAAG GCAACAAGAT CATCGACGTC
AACCTGGGCA CTGTCAGTAT CGATGCCCTG GGTGGCACCG CTGGTGGCGG CATCGCGGCC
GGCACCAACA TCAACCTGGA TCTGGACTGT GGCGCTACTG GTACCGGCCT GACCCACGTT
CAGCTCCGCT TCGACCCGCA ATCCGGCTCC CAGGTCGACC CCAACAACAA CCAGTTGCTG
AAGCTGACTG GCGGCTCGAC GGCCAAAGGT GTAGGCATCG GCCTGTACAA GCAGGACGGT
ACCCGTATCA ACCTGTCCAA CTCCAGCGAC GTCTTCGAGG AAGCGCTGGT CAAGGCTGGC
ACCGATCCGG ACTACACCTA TAGCGCCAAG CTGAACCTGC GCGCCGGTTA TGTCATGACC
GCCTCCGATG CCAAAGGCGT AACTGCGGGT TCCGCGAACG GCACCCTGCC GTTCACCCTG
ACCTACCGTT AA
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| Protein sequence | MSISMKSLLA AAVASLVVGN AMAADGTINF TGNITAASCN ITGGAGTGVT GEKGNKIIDV
NLGTVSIDAL GGTAGGGIAA GTNINLDLDC GATGTGLTHV QLRFDPQSGS QVDPNNNQLL
KLTGGSTAKG VGIGLYKQDG TRINLSNSSD VFEEALVKAG TDPDYTYSAK LNLRAGYVMT
ASDAKGVTAG SANGTLPFTL TYR
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