Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4387 |
Symbol | dapA |
ID | 5355827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4517214 |
End bp | 4518092 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640813436 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001349739 |
Protein GI | 152984603 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGCGG GCAGTATGGT GGCACTGGTC ACCCCCTTCG ATGCTCAGGG TCGACTGGAC TGGGACAGCC TCGCCAAGCT GGTGGACTTC CACCTGCAGG AAGGCACCAA CGCCATCGTC GCCGTCGGCA CCACCGGTGA ATCGGCCACG CTGGACGTGG AAGAGCACAT CCAGGTGATC CGTCGCGTGG TCGACCAGGT CAAGGGGCGC ATCCCGGTGA TCGCCGGCAC CGGCGCCAAC TCCACCCGCG AGGCGGTGGC GCTGACCGAG GCCGCGAAGA GCGGCGGCGC CGACGCCTGC CTGCTGGTGA CGCCGTACTA CAACAAGCCG ACCCAGGAAG GCATGTACCA GCACTTCCGC CATATCGCCG AAGCCGTTGC GATCCCGCAG ATCCTCTACA ACGTGCCGGG CCGCACCTCC TGCGACATGC TTCCGGAGAC CGTCGAGCGC CTGTCCAAGG TGCCGAACAT CATCGGCATC AAGGAAGCCA CCGGCGACCT GCAGCGCGCC AGGGAAGTCA TCGAGCGCGT CGGCAAGGAC TTCCTCGTCT ATTCCGGCGA CGACGCCACC GCCGTCGAGC TGATGCTGCT GGGCGGCAAG GGCAACATTT CGGTCACCGC CAACGTCGCG CCGCGCGCCA TGAGCGACCT GTGCGCCGCC GCCATGCGCG GCGACGCCGC TGCCGCGCGG GCCATCAACG ACCGCCTGAT GCCGCTGCAC AAGGCGCTGT TCATCGAATC CAACCCCATT CCGGTGAAGT GGGCCCTGCA TGAGATGGGT CTGATCCCCG AGGGCATCCG CCTGCCCCTG ACCTGGCTCA GCCCGCGTTG CCACGAGCCG CTGCGTCAGG CCATGCGCCA GACCGGCGTA TTGGCTTGA
|
Protein sequence | MIAGSMVALV TPFDAQGRLD WDSLAKLVDF HLQEGTNAIV AVGTTGESAT LDVEEHIQVI RRVVDQVKGR IPVIAGTGAN STREAVALTE AAKSGGADAC LLVTPYYNKP TQEGMYQHFR HIAEAVAIPQ ILYNVPGRTS CDMLPETVER LSKVPNIIGI KEATGDLQRA REVIERVGKD FLVYSGDDAT AVELMLLGGK GNISVTANVA PRAMSDLCAA AMRGDAAAAR AINDRLMPLH KALFIESNPI PVKWALHEMG LIPEGIRLPL TWLSPRCHEP LRQAMRQTGV LA
|
| |