| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4249 |
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| Symbol | |
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| ID | 5355539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4385335 |
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| End bp | 4386639 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640813299 |
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| Product | hypothetical protein |
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| Protein accession | YP_001349603 |
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| Protein GI | 152985451 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGTC GTCGCTATAC GGGCTCCAAT CCTTCCCTGC GCCGGGTGCT CTATCGCGCA
CACCTGGGAG TGGCACTGGT CGCCGTGTTC ACCGCCGGGC TGGCGGTGAC CCTGGTCGGG
CTGCTGACCC TGCGCGCCTA CGCCGACCCC AACCAGCAAC TGATCGCCCG CTCGATCAGC
TATACCGTCG AGGCCGCGGT GGTCTTCGGC GACGCCCAGG CCGCCGAGGA GTCCCTGGCA
CTCATCGCGT CCAGCGAGGA GGTCTCCAGC GCCATCGTCT ACGACAGGCA GGGCCGGACC
CTGGCCAGCT GGCACCGGGA AAGCACCGGG CCGCTGCACC TCATGGAACA GCAACTGGCA
CACTGGCTGC TCAGCGCGCC GACCGAGCAG CCGATCCTCC ACGAAGGGCA GAGGATCGGC
TCGGTGGAAG TCAAGGGTTC CGGCGGCAGC CTGCTGCGCT TCCTGCTCAC CGGCTTCGCC
GGGATGATCC TCTGCCTGCT GCTCACCGCG CTGGGCGCCT TCTACCTGTC GCGGCGCCTG
GTCCGCGGCA TCGTCGGACC GCTCGACCAA CTCGCCCGGG TCGCGCATAC CGTGCGCCGC
GAGCGCGACT TCGAGAAACG CGTGCCGGAG GCCGCCATCG CCGAGCTGAG CCAGCTGGGC
GAGGACTTCA ACGCCCTGCT CGACGAGCTC GAATCCTGGC AGGCGCGCCT GCGGGACGAG
AACGCCTCGC TGGCGCACCT GGCCCATCAC GACAGCCTGA CCAACCTGCC CAACCGCGCG
TTCTTCGAAG GCCGCCTGAG CCGCGCCCTG CGCGACGCCA TGCAGCATCG CGAACAGCTG
GCGGTGCTGT TCATCGACAG CGACCGCTTC AAGGAGATCA ATGACCGTCT CGGCCACGCA
GCCGGCGACA CCGTGCTGGT CAACATCGCC ATGCGCATCC GCGGCCAGTT GCGCGAGAGC
GACCTGGTGG CGCGCCTGGG TGGCGACGAA TTCGCCGTGC TGCTCGCGCC GCTGGCCTCC
GGCTCCGACG CCCTGCGCAT CGCCGACAAC ATCATCGCCA GCATGCAGGC GCCAATCCGC
CTGGCCGACG GCAGCACCGT CAGCACCTCG CTGACCATCG GCATCGCTCT CTATCCCGAT
CACGCGGACA ACCCCGCGGC GCTGCTCCAC GACGCCGACA TGGCGATGTA CATCGCCAAG
CGCCAGGCCC GAGGCAGCCG ACGCCTGGCG GACCTCAACG ACCCCCGCAT CCTGCAACAA
GAAAAGGAGA TAGACCGTGC TACCCCAGAG GTTCCACCCA AGTAG
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| Protein sequence | MNRRRYTGSN PSLRRVLYRA HLGVALVAVF TAGLAVTLVG LLTLRAYADP NQQLIARSIS
YTVEAAVVFG DAQAAEESLA LIASSEEVSS AIVYDRQGRT LASWHRESTG PLHLMEQQLA
HWLLSAPTEQ PILHEGQRIG SVEVKGSGGS LLRFLLTGFA GMILCLLLTA LGAFYLSRRL
VRGIVGPLDQ LARVAHTVRR ERDFEKRVPE AAIAELSQLG EDFNALLDEL ESWQARLRDE
NASLAHLAHH DSLTNLPNRA FFEGRLSRAL RDAMQHREQL AVLFIDSDRF KEINDRLGHA
AGDTVLVNIA MRIRGQLRES DLVARLGGDE FAVLLAPLAS GSDALRIADN IIASMQAPIR
LADGSTVSTS LTIGIALYPD HADNPAALLH DADMAMYIAK RQARGSRRLA DLNDPRILQQ
EKEIDRATPE VPPK
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