| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4145 |
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| Symbol | aprE |
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| ID | 5359011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4282857 |
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| End bp | 4284155 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640813195 |
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| Product | alkaline protease secretion protein AprE |
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| Protein accession | YP_001349499 |
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| Protein GI | 152986009 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0361435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGTA TGGCGAAACG CGACGAGAAC GCCTATGCGC GCATGGGCTG GCTGCTGGTG
CTGTTCGGCT TCGGCGGCGC GCTGCTGTGG GCGGCCTTCG CGCCGCTCGA CCAGGGCGTG
GCGGTGCCGG CCACGGTGAT CATTTCCGGC CAGCGCAAGT CGGTACAGCA CCCGGTCGGC
GGGGTGGTCA AGCACATCCT GGTGCGCGAC GGCCAGCGCG TCGAGGCGGG CGAGCCGCTG
ATCCGCCTGG AGCCGACCCA GGCCCAGGCC AACGTCGACT CGCTGGTCAA CCAGTACGTC
AACGCCCGGC TCAACCAGGC GCGCCTGCAG GCCGAATACG ACGGCCTGCA TACCCTGGAG
ATGCCCACGG GGCTGGCCGG TCAGGCGCCG GTGGCGAGCC TCGGCGAGCG CCTGGAGCTG
CAACGGCAGT TGTTGCGCAG CCGCCAGACC GCGCTGGGTA ACGAACTCTC CGCGCTGCGC
GCGAACATCG AGGGCCTGCG CGCGCAACTC GAGGGTCTGC GCCAGACCGA GCAGAACCAG
CGCCTGCAGC AACGCCTGCT GAACAGCCAG TTGAGCGGCG CGCGCGATCT CGCCGAGGAA
GGCTACATGC CGCGCAACCA GTTGCTCGAA CAGGAACGCC AGCTGGCCGA GGTGAACGCG
CGGTTGTCGG AGAGCAGCGG CCGCTTCGGG CAGATCCGCC AGAGCATCGC CGAGGCGCAG
ATGCGCATCG GCCAGCGCCA GGAGGAATAC CGCAAGGAGG TCAGCGGGCA ACTGGCGGAA
ACCCAGGTCA ACGCGCGGAC CCTCTGGGAG GAACTGTCCT CGGCGCGCTA TGAATTGCAG
CACGCCGAGA TCCGCGCGCC GGTCGGCGGC TACGTCGCCG GCCTCAAGGT ATTCACCGAG
GGCGGGGTGA TCGGCCCCGG CGAACTGCTG ATGTACATCG TGCCCAACAG CGACAGCCTG
GAAGTGGAGG GCCAGCTCGC GGTGAACCTG GTCGACCGGA TCCACAGCGG GCTGCCGGTG
GAGATGCTGT TCACCGCCTT CAACCAGAGC AAGACCCCGC GGGTCACCGG CGAGGTGACC
ATGGTCAGTG CCGACCGCCT GCTCGACGAG CAGAACAAGC AGCCCTACTA CGCGTTGCGC
GCGCAGGTCG ACGCGGCCGG GATGGGCAAG CTGCAGGGCC TGCAGATCCG CCCGGGGATG
GCGGTGCAGG TGTTCGTCCG CACCGGCGAG CGCTCGCTGC TCAACTACCT GTTCAAGCCC
CTGCTGGACC GCGCCCACGT GGCGCTGGCG GAGAACTGA
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| Protein sequence | MTRMAKRDEN AYARMGWLLV LFGFGGALLW AAFAPLDQGV AVPATVIISG QRKSVQHPVG
GVVKHILVRD GQRVEAGEPL IRLEPTQAQA NVDSLVNQYV NARLNQARLQ AEYDGLHTLE
MPTGLAGQAP VASLGERLEL QRQLLRSRQT ALGNELSALR ANIEGLRAQL EGLRQTEQNQ
RLQQRLLNSQ LSGARDLAEE GYMPRNQLLE QERQLAEVNA RLSESSGRFG QIRQSIAEAQ
MRIGQRQEEY RKEVSGQLAE TQVNARTLWE ELSSARYELQ HAEIRAPVGG YVAGLKVFTE
GGVIGPGELL MYIVPNSDSL EVEGQLAVNL VDRIHSGLPV EMLFTAFNQS KTPRVTGEVT
MVSADRLLDE QNKQPYYALR AQVDAAGMGK LQGLQIRPGM AVQVFVRTGE RSLLNYLFKP
LLDRAHVALA EN
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