| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4138 |
|---|
| Symbol | |
|---|
| ID | 5357992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4273263 |
|---|
| End bp | 4274180 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640813188 |
|---|
| Product | putative dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_001349492 |
|---|
| Protein GI | 152988827 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.565611 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC ACGTCAACTG GAGCGGCGTA TTCCCCGCGG TCACCACCCA ATTCAACGCC
GATTTCTCGG TGAACCTGGA GGAAACCCAC ACGGTCATTT CCAACCTGGT GCGCGACGGC
GTGTCGGGGC TGGTGGTATG CGGCAGCGTC GGCGAGAACA CCTCGCTGAC CATCGAGGAG
AAGATGGCCG TCACCGAGGT CGCCAAGGAC GCCTCCGGCG GCCGCGTGCC GGTGATCTGC
GGGATCGCCG AGTTCACCAG CGCCGGCGCG GCGAAGGTGG CCAAGGCGGT GGAGCGGGTC
GGCGTCGACG GCATCATGGT GATGCCGGCG CTGGTCTATT CCTCCAAGCC GCACGAGACC
GCCGAGCATT TCCGCAGCGT GGCCAGCGGC ACCGACCTGC CGGTGATGGT CTACAACAAC
CCGCCGATCT ACCGGAACGA CGTCACCCCG GACATCCTGG TTTCCCTGGC CGACTGCGAG
AACATCGTCT GCTTCAAGGA CAGCTCCGGC GACACCCGCC GCTTCATCGA TGTACGCAAC
CAGGTGGGCG AGCGCTTCAT CCTCTTCGCC GGCCTCGACG ACGTGGTCCT GGAAAGCGTG
GCGGTGGGTG CCCAGGGCTG GATCTCGGGA ATGTCCAACG TGTTCCCGAA GGAAGGCGAG
ACCATCTTCC GCCTGGCCAG GGCCGGGCGC TTCGCCGAGG CGATGCCGAT CTACGAGTGG
CTGATGCCGA TCCTCCATCT CGACGCCCGC CCCGACCTGG TGCAGTGCAT CAAGCTCTGC
GAGGAGCTCG CCGGTCGCGG CAGCGCCCTC ACCCGCCCGC CGCGCCTGGC CCTGCGCGGC
GCCGATCGCG AGCACGTCGA GCGGATCATG GCCAGGGCCC TGGCCAGCCG CCCGGCGCTG
CCGGACGTGG GACTGTAG
|
|---|
| Protein sequence | MSKHVNWSGV FPAVTTQFNA DFSVNLEETH TVISNLVRDG VSGLVVCGSV GENTSLTIEE
KMAVTEVAKD ASGGRVPVIC GIAEFTSAGA AKVAKAVERV GVDGIMVMPA LVYSSKPHET
AEHFRSVASG TDLPVMVYNN PPIYRNDVTP DILVSLADCE NIVCFKDSSG DTRRFIDVRN
QVGERFILFA GLDDVVLESV AVGAQGWISG MSNVFPKEGE TIFRLARAGR FAEAMPIYEW
LMPILHLDAR PDLVQCIKLC EELAGRGSAL TRPPRLALRG ADREHVERIM ARALASRPAL
PDVGL
|
|---|
| |