Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4109 |
Symbol | |
ID | 5354751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4242269 |
End bp | 4243774 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640813158 |
Product | MFS family transporter |
Protein accession | YP_001349462 |
Protein GI | 152986037 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.573233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGGC AGAACCGCTG GCTGGTCCTG GCCATCGTCT CCAGCGCCCT GTTCCTCATC ATCATCGACA TGACCGTGCT CTACACGGCC CTGCCGCGCC TGACCCACGA CCTCGGCGCG ACGGCGGCGG AGAAGCTCTG GATCGTCAAC GCCTACCCGC TGGTGGTCGC CGGCCTGCTG CCCGGCGCCG GGGTACTCAG CGACCGCCTC GGTCACAAGC GGCTGTTCCT CGCCGGCCTG CCGCTGTTCG GCCTGGCCTC GCTGTGCGCC GCCTTCGCCC CCGACGCCGG CGCGCTGATC GGCGCCCGCG CCGGGTTGGC GGTGGGCGCG GCACTGATGA TGCCGGCGAC CTTGTCGATC GTCCGCCATG TCTTCCAGGA CGAACGCGAA CGCGCCCTGG CCATCGGTAT CTGGGCCTCC GTCGCCTCCG CCGGCGCGGC GCTGGGGCCG GTGGTCGGCG GAGTGCTGCT GGAGTTCTGC TGGTGGGGCT CGGTGTTCCT CGTCAACGTC CCGGTGGTGG TCATCGCGCT GCTGCTGGCC GTGCCGACCA TTCCCGCCTG CGGCGGCCAG TCGCGCAAGC CCTGGGACCC GCTCGGCTCG CTGCAGGTGA TGCTAGGCCT GGTCGGGCTG GTCTACGCGA TCAAGACGCT CGGCACCCGC GCCCCCGACT TCTGGCTGGC CGCCGGCGCC GCCCTCGGCG GAACGGCATG CCTATACCTG TTCGTGCGTC GGCAACGCCG TGCCCGCGAA CCGATGATCG ACTTCGCGCT GTTCCGCAAC CGGCGCTTCG CCCGCGGCGT CGCGGTGGCC CTGGTGGCGA CCATGGCGCT GGTGGGCATG GAGCTGGTGT TCAGCCAGCA CCTGCAACTG GTGCAAGGCC TGACGCCGCT GCAGGCCGGC CTGTTCGTCC TGCCGATCCC GCTGGCCTCG CTGGTGGTCG GGCCGCTGGC CGGCTGGCTG GTGCCGCGCT GGGGCGAGAA CCGGGTGATG TGCGCCTCCC TGCTGCTCGG CAGCGCCGGA TTGCTCGGCC TGGCCTTGTC CTACCAGGCC GCCACCGGAG CGCAACTGGC CAGCCTGGTG TTGCTCGGCG TCGGCTTCGG CGGCGCGATG ACCGCCGCCT CCACCGCGGT GATGCTCAAC GTAGACGAAC ACAGTTCCGG AATGGCGGCC GCCATCGAGG ACGTGTCCTA CGAATTGGGC GGGGTGATCG GCGTGACCCT GCTCGGCAGC CTGATGAGTT TCGTCTACGG GATCTCCCTG GCGCTGCCCT CGCCCGACCT GCCGGCACGG GTCCGTGACA GCCTCGACGA CGCCCTGATG GTCGCCGAGG GCCTGGCGCC GGAGGTCGCG TCGCGGCTCG TCGAGCTTGC CCGGCAGGCT TTCGACCAGG CCTTCGTCGC CGTGCTACTG GCCGCCGCCG CGCTGCTCTT CCTCAGCGCC ATGGCGGTCC TGCGCCAGCC GCGTCCGGCT ACAGAGCCAG CGCCACCAGC ACCGCGCACT CGGTAA
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Protein sequence | MFRQNRWLVL AIVSSALFLI IIDMTVLYTA LPRLTHDLGA TAAEKLWIVN AYPLVVAGLL PGAGVLSDRL GHKRLFLAGL PLFGLASLCA AFAPDAGALI GARAGLAVGA ALMMPATLSI VRHVFQDERE RALAIGIWAS VASAGAALGP VVGGVLLEFC WWGSVFLVNV PVVVIALLLA VPTIPACGGQ SRKPWDPLGS LQVMLGLVGL VYAIKTLGTR APDFWLAAGA ALGGTACLYL FVRRQRRARE PMIDFALFRN RRFARGVAVA LVATMALVGM ELVFSQHLQL VQGLTPLQAG LFVLPIPLAS LVVGPLAGWL VPRWGENRVM CASLLLGSAG LLGLALSYQA ATGAQLASLV LLGVGFGGAM TAASTAVMLN VDEHSSGMAA AIEDVSYELG GVIGVTLLGS LMSFVYGISL ALPSPDLPAR VRDSLDDALM VAEGLAPEVA SRLVELARQA FDQAFVAVLL AAAALLFLSA MAVLRQPRPA TEPAPPAPRT R
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