Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4106 |
Symbol | |
ID | 5353513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4239751 |
End bp | 4241571 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640813156 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_001349460 |
Protein GI | 152987960 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGTTT ACAAAGCCCC GCTGCGCGAC ACGCGCTTCC TGCTCAACGA GGTCTTCGAT TTCCCCGCCC ACTACCGCGA CCTGGTCAAC GGCGCCGAGG CCACGCCGGA CATGGTCGAC GCGATCCTCG GCGAGTGCGC GAAGCTCTGC GAGGAAGTCA TCGCGCCGCT CTACCACAGC GGCGACGAGG AAGGCTGCCA CCTGGAGAAC GGCGAGGTAC GCACGCCCAG GGGCTACAAG GAAGCCTACG AGGCCTATGT CGCCGGCGGC TGGCAGGGTC TCTCGCACCC GGTGGAATAC GGCGGCCAGG GCCTGCCGAT GAGCCTCGGC GCGCTCAAGC AGGAGATGAT GGGCACCGCC AACTGGCCGT TCTCCATGTA TCCCGGCCTC TCCCTCGGCG CGATGAACAC CCTGATGCAA CATGGCACCG AGGAGCAGAA GCAGACCTAC CTGACGCCGC TCACCGAAGG TCGCTGGGGC GGCACCATGT GCCTCACCGA GCCGCAGTGC GGCACCGATC TCGGCCAGGT GAAGACCCGC GCCGAGGCCA ACCCCGACGG TAGCTACGCG ATCAGCGGGA CGAAGATCTT CATCTCTTCC GGCGAACACG ACCTGACCGA GAACATCGTG CACATCGTCC TCGCCCGCCT GCCGGACGCG CCGAAGGGCA CCCGCGGCAT CTCCCTGTTC ATCGTGCCCA AGTTCCTCCC CGGCGCAGGT GGCTCCCTCG GCCCGCGCAA CGGCGTGAGT TGCGGCGCGC TGGAGAAGAA GATGGGGATC AAGGCCTCGG CCACCTGCGT GATGAACTTC GACGACGCCA CCGGCTTCCT CATCGGTCCG CCGAACAAGG GCCTGGAATG CATGTTCACC TTCATGAACA GCGCCCGCAT CGGCACCGCC ATCCAGGGCG TGGCCACCGC CGAGCTGGCC TACCAGGGCG CCCTCGCCTA CGCCCGCGAG CGCCGCTCGA TGCGCGCGCT CTCCGGGACC AAGGAACCCG GGCAGGTCGC CGACAGCCTC ATGCACCACG GCGACGTGCG GCGCATGCTG CTGACCCAGA AGGCCATCGC CGAGGGCGGC CGCGCACTGG TCTACCTGGC GACCCAGTAC GCCGACCGGA TGATCCAGGG CATCCTCACC AGCGACGACG CCGAATACGC CCGCTGGGAC GACAAGCTCG GCTTCCTCAC GCCGATCCTC AAGGGCTGCC TGACCGAACT CGGCCTGGAG AGCGCCAACC TCGGCATGCA GGTATTCGGC GGCCATGGCT ATATCCGCGA ACATGGCATG GAGCAGATCG TCCGCGACGC GCGGATCGCC ACCCTCTACG AAGGCACCAC CGGCATCCAG GCCCTCGACC TGCTCGGACG CAAGGTCCTG CTGATGACCC AGGGCAAGGC CGTGCGCGAC TTCACCAGGG TCGTGGCGCA GTTCGCCATC GACCTGCTGA AGAACGAACC GAGGATGCGC GGCCGCGCCC TGGTGCTGCT CAAGCTCTGC GCCCAGTGGA ACCTGCTGAC TCTGCGCATC GCCCTGACCG CGCGCAAGCA ACGCGACCTG GTGGGCACCG CCAGCCACGA CTACCTGATG TTCTCCGGCT ACGCCACCCT GGCCTATTCC TGGGCCCTGC AGGAAGCCGC GGCGCGCCGC CGACTGCGCC TGGGCGGCAG CGAATCGGCG GACTTCTACA AGGCCAAGAT CGCCACCAGC GACTTCTACT TCGCGCGTCT GCTGCCGCGC GCCAAAGGCC ACGCGGCGGC GATGGCGAAG CCGGTCGGCT CGATCATGGA CCTGAAGAGC GAGCACTTCG CCTTCGACTG A
|
Protein sequence | MPVYKAPLRD TRFLLNEVFD FPAHYRDLVN GAEATPDMVD AILGECAKLC EEVIAPLYHS GDEEGCHLEN GEVRTPRGYK EAYEAYVAGG WQGLSHPVEY GGQGLPMSLG ALKQEMMGTA NWPFSMYPGL SLGAMNTLMQ HGTEEQKQTY LTPLTEGRWG GTMCLTEPQC GTDLGQVKTR AEANPDGSYA ISGTKIFISS GEHDLTENIV HIVLARLPDA PKGTRGISLF IVPKFLPGAG GSLGPRNGVS CGALEKKMGI KASATCVMNF DDATGFLIGP PNKGLECMFT FMNSARIGTA IQGVATAELA YQGALAYARE RRSMRALSGT KEPGQVADSL MHHGDVRRML LTQKAIAEGG RALVYLATQY ADRMIQGILT SDDAEYARWD DKLGFLTPIL KGCLTELGLE SANLGMQVFG GHGYIREHGM EQIVRDARIA TLYEGTTGIQ ALDLLGRKVL LMTQGKAVRD FTRVVAQFAI DLLKNEPRMR GRALVLLKLC AQWNLLTLRI ALTARKQRDL VGTASHDYLM FSGYATLAYS WALQEAAARR RLRLGGSESA DFYKAKIATS DFYFARLLPR AKGHAAAMAK PVGSIMDLKS EHFAFD
|
| |