| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4063 |
|---|
| Symbol | |
|---|
| ID | 5357481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4198784 |
|---|
| End bp | 4200718 |
|---|
| Gene Length | 1935 bp |
|---|
| Protein Length | 644 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640813113 |
|---|
| Product | DNA/RNA non-specific endonuclease |
|---|
| Protein accession | YP_001349417 |
|---|
| Protein GI | 152986187 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC GCAAGCGCAA CGCCCGGCGG GCCACGCCGG AAGAACTGCG GGTCTGCTCG
GTACTGAAGG AAAAGGACAC CCGCGAGGAG CTCGCCGAAC TCGCCGCCCG GGGCGAGTGG
AGCAACGTGC CGGCCTACAA CGCCAGCCGT GGGCAGATCG CCGAGCACCT GGGCAAAAGT
CTTTCGCCCG AGTCGGACGC CTCGTTCTTC GACTCGCGGC GCTTCAGCGA GGCGATCGTC
CTGCTCAAGA GCCGGCCGGT GCTGCTGGTG AAGAACGGCA TTTTCGACGA AGCGCCGCTG
GCCGGCCTGG AACAGCGCCT GAAGCGGCAC CGCGCCGCGC TGGCCACGCC GATCCGCTCG
GTCGGCCGCC TGGAACTGAT CGACCACGAC AGCATGGACT GGTGTGGCAC CGGCTGGCGT
ATCGAGGACG ACCTGATCGT CACCAACCGC CACGTCGCCA GTCTGTTCGC CGAGCGCCAG
GGCAACCTGT TCCGTTTCCG CCTCAACCAG GCCGGCAAGC AGGTGCGCAC CCGCGTGGAC
TTCCGCGAGG AGTATCGCCA GCCGGAGAGC GACGAGCATG TGATCGCGCG GGTCCTGTGG
ATTGCCCCGG ACGTTTCCGA GGCGCCGGAC ATGGCGATCC TCCAGGTGGT GAAGGGCGAC
CTGCTGCCGC CGCCGCTGAG CCTCGCCCGC CGGGACGCCG AGCCGCGCCA GGCGGTGGCG
GTGGTCGGCT ACCCGGCGCG CGACAGCCGC AACGACGCCG GGGCGATGGA AGACATCTTC
GGCAACATCT ATGACGTCAA GCGCTTCGCG CCCGGCGAAG TCGTGGGATT GCCCGGGGAT
GCCTGGTACC TGACCCACGA TTGCTCGACC CTGGGCGGCA ACTCCGGTTC GGCGGTGCTC
TCGATCGACG GCGGCGAGGT GGTCGGCCTG CACTTCGGTG GCCAGTTCCG CAAGACCAAC
TATGCGGTGA AGGCCAGCGT GATCCGCAGC CTGCTGGCGC GGCGCGCCTG GGTGCCGGTG
GGCGAGGCGG AACTGAAGTG CGGTGCGCCG CGCTTCCAGG AGAAGAAGCG CAGCGTCGCC
GACCTGGCCG GGCGCAAGGG CTTCGACGAG GCCTTCCTCG GGCCGAAGGC GGCCTTGCCC
AAGCCGGGCA AGAGCCACCA GGTACTGCCG GTGGGCAAGG GCACGCGCCT GGACTACCTG
CATTTCTCGG TGGTGATGAG CGCCAGCCGG CGCTTGCCGA TCCTCACCGC GGTGAATATC
GACGGCGCGC TCAAGCGTTC GCTCAAGCGC AAGGATTCCT GGGGCTTCGA CCCGCGCATC
GAGGCGGCCG CCCAGGTCGG ACACAAGGAC TTCTACGGCC CGGCCTCGTT CGACAAGGGT
CACATGGTGC GTCGCGAGGA TCCCGGCTGG GGCGACAGCG ACGCCGTCGC CCGGCAGGCC
GAGGACGACA CCTTCGTCTA CACCAACGCG GTGCCGCAGG TGGCGCAGCT CAACCAGCGC
AGCTGGCTGT CGCTGGAGGA CTACGTTTTG CAGAACGCCA GGAGCGAGGG CTTCCGCATC
TCGGTATTCA CCGGCCCGGT GTTCCGCGAG GACGATCCGC TCTTCCAGGG CGTGCAGGTG
CCGCTGGAGT TCTGGAAGGT GGTGGCGATG ATCGATGCCG ACAGCGGCGA ACTGGGGGTC
TCCGCCTATC TGCTCGGGCA GGAAGGGATG ATGCCCGGCG AAGGCTTCCG CTATGGCGCG
TTCAAGACCT ACCAGGTGCC GTTGGCGAAG GTCGAGGCCA GCGCCGACCT GCGTTTCTCC
AGCGCCCTGC GCAAGGCCGA CGTGCTCGCC GGCACGCCGC TGGAGGAAGC GCTGGAAGCC
GGGCGCTTCA TCGAGATCAA CGGACCGGAC GACCTCCTGC TAGGCCGGCC GACGCCGGCC
GGCAAGCGCC GCTGA
|
|---|
| Protein sequence | MAMRKRNARR ATPEELRVCS VLKEKDTREE LAELAARGEW SNVPAYNASR GQIAEHLGKS
LSPESDASFF DSRRFSEAIV LLKSRPVLLV KNGIFDEAPL AGLEQRLKRH RAALATPIRS
VGRLELIDHD SMDWCGTGWR IEDDLIVTNR HVASLFAERQ GNLFRFRLNQ AGKQVRTRVD
FREEYRQPES DEHVIARVLW IAPDVSEAPD MAILQVVKGD LLPPPLSLAR RDAEPRQAVA
VVGYPARDSR NDAGAMEDIF GNIYDVKRFA PGEVVGLPGD AWYLTHDCST LGGNSGSAVL
SIDGGEVVGL HFGGQFRKTN YAVKASVIRS LLARRAWVPV GEAELKCGAP RFQEKKRSVA
DLAGRKGFDE AFLGPKAALP KPGKSHQVLP VGKGTRLDYL HFSVVMSASR RLPILTAVNI
DGALKRSLKR KDSWGFDPRI EAAAQVGHKD FYGPASFDKG HMVRREDPGW GDSDAVARQA
EDDTFVYTNA VPQVAQLNQR SWLSLEDYVL QNARSEGFRI SVFTGPVFRE DDPLFQGVQV
PLEFWKVVAM IDADSGELGV SAYLLGQEGM MPGEGFRYGA FKTYQVPLAK VEASADLRFS
SALRKADVLA GTPLEEALEA GRFIEINGPD DLLLGRPTPA GKRR
|
|---|
| |