| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4060 |
|---|
| Symbol | |
|---|
| ID | 5356578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4196572 |
|---|
| End bp | 4197351 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640813110 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001349414 |
|---|
| Protein GI | 152984432 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACA AGCGAATCCT GGTGACCGGG GCCGGCAGCG GTTTCGGTCG CGAAGTGGCG
TTACGCCTGG CCGAACGCGG CCATCGGGTG ATCGCCGGGG TGCGCAGCGC CGGCCAGGCC
GGCGACCTGC GCGAGGAGGC CGGGCGGCGT GGCGGCACGC TGCGGGTGGA GGTCCTCGAC
ATCACCGTCG GCGCCGATCG CGAGCGCGCC TGGGAGTGGG ATGTCGACGT TCTCTTGAAC
AACGCCGGCA GCGCCGAGGC CGGGGCCAGC GCGGAGATTC CGCTGGAGCT GGTGCGCGCG
CTGTTCGAGA CCAACGTGTT CGCCAGCCTG GCGCTGACCC AGGGTGTCGT ACGCCGCATG
GTCGAGCAGA AGCGTCGCGG CCGGGTGCTC TTCGTCTCTT CCATCGCCGG CCTGCTCACC
GGGCCCTACA CAGGCGCCTA CTGCGCCTCC AAGCATGCCC TGGAGGCCTT CGCCGAAGCC
CTGCATGCGG AACTGAAGCC GTTCGGCATC CAGGTCGGAA CGATCAACCC CGGCCCGTAC
CAGACCGGCT TCAACGACCG CATGATGGAG ACCTGGAAGC GCTGGTACGA CCCGCGGCGG
CATTTCACCG ACTACCGCGG CGTGAGATTC CCCTTCGAAC AGCACGATCC CGAGGAAATG
ATCGCCAGCA TGGTTGCGCT GGTCGAAGCC GCCGACGGCC CGTTCCGTAC CCTCCTGCCG
GCGAGTTTCG TCGAGGCGGT CAGGCAGGAG CAGGCCCGCG CCTGGGAGCG CCGCCTGTGA
|
|---|
| Protein sequence | MTHKRILVTG AGSGFGREVA LRLAERGHRV IAGVRSAGQA GDLREEAGRR GGTLRVEVLD
ITVGADRERA WEWDVDVLLN NAGSAEAGAS AEIPLELVRA LFETNVFASL ALTQGVVRRM
VEQKRRGRVL FVSSIAGLLT GPYTGAYCAS KHALEAFAEA LHAELKPFGI QVGTINPGPY
QTGFNDRMME TWKRWYDPRR HFTDYRGVRF PFEQHDPEEM IASMVALVEA ADGPFRTLLP
ASFVEAVRQE QARAWERRL
|
|---|
| |