Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4057 |
Symbol | |
ID | 5357404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4193466 |
End bp | 4195268 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640813107 |
Product | carbohydrate-binding family V/XII protein |
Protein accession | YP_001349411 |
Protein GI | 152986178 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.770883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCATCG GCGACGCCCT GACCGCCAAC ATGGCGCAGG TATGGCGCAG CAACGCGGCG AAGATCTCCG CCTACGCTCC CTCGGTGGTG CCGGTCGACG ACGAGCGGGC GACCCACGTC CTGCACGAGG GTTTCAGCCT GGCCAGGGCG GACAGCTGGA AGCACTTCGT CGTCGATGTC CCCGCCGGTA CCCGGCGCCT GGCCTTCGGC ATCACCTCGG GGCCGCGCCA CGAACCGACC GGCAGGACCG CGATCTACCT CAAGCGTGAC GGCCGACCGA GCGAAACCGA CTTCGACCAC CGTTCGCGCG AGGGCGTGGT GGCCGCGCTC GGCGTCCACG AAGAGGCTGG CGGCCGCTGG TACGTCTCGG TGAAAGGCAA CAACGCCGAC ATCGACGACC TGATCCTCGA CGGCCATGCC TTCGCCGTCG ACAGCGACAG CGTCGAGGCC CGCTACCTGC GCCTGGTGGT GGAGTCCGAG GCGAGCGGCA AGGGCGGCGC CAGCGCCGCC GAGATCCAGC TGGCCGACTC GCGCAGCCGT CTGCTCGATC CGCGCAACTG GCGGATCCAC TCGGTGAGCA GCGCCGAGGG CGCCAGGGGC GCGGCGGCCA ACGCCATCGA CGGTGACCCG AAGACCTTCT GGGCTAGCGC GGCGGGCGCC GGCTTCCCCC ACGAGATGAT CATCGACCTG GGCCGGGACA GCCGTTTCTC GCACCTGCGT TACCTGCCAC GGCAGGACAA CAGTCAGGTC GGCAACATCA AGGGCTATAG GCTTTACGCC AGCGACAATC CTTATGGCGG CTGGGTCGAA GTGGCCGACG GCAGCTTCGC CGCGGACAAC AAGCTGAAGA TCCAGGTGCT CAAGCCGAAG GAAAGCAACC TGCCGCCGCT GGCGCAGATC GACGGCAAGG CCGAAGCCGA GGCCGGCGAG CGGGTGGTGC TCGATGCCTC CGCCTCTTCG GATCCCCAGG GCGCCGCACT GAGCTACGCT TGGACGGTAT CGCCGGCGCT GGATATGGAG CTGGACGGCC CGCGCCTGAG CTTCGTCGCG CCGAGCCTGG CGCAGGACAC GCCCTATCGC TTCACCCTGA CCCTGGACAA CGGCAAGCAG CGCGTGACCC GCGACCACGA GGTGAAGGTC AAGGCTGCTC AGGATGCCAG TTGCCGTCCT GCCTGGATGC GCAACAAGGC CTATCTGTCC GGTGACATGG TGCAGCACGG GGGGCGCCAG TACTATGCGC GCTGGTGGAC CCAGGGCCAG GAGCCGGGTA ACCCGAACTT CACCGGTGGC GATGGCAGCG GCAAGGTCTG GCGCGACGAC GGTCCCTGTC AGCAGGGCGA AGTGCCGCCG CCGCTGGCGC AGATCAGTGG CAAGACCGAC GTCGCGGCGG GCGAGCGGGT GGTTCTGGAC GCTTCCGGGT CGAGCGATCC GAACGGCCTT GAGTTGAGCT ACCAGTGGAG CGTGTCGCCG GCGCTGGCGT TCGAAGCCGA CGGTGCGCGC CTGAGCTTCG TCGCGCCGAA GGCGCCGCAG GACAGTCGCT ATACCTTCAG CCTGACCCTC GGCAACGGCA GCCACAGCGT GCGCCAGGAT CACGTGGTGC GGGTCGCGGC GGAACAGCCG GGAGCGACCT GCGGCAGGTC CTGGAACGCT TCGACGGCCT ACGTCGGCGG CGACCGGGTC ACGTACGGCG GCCGCCAGTA CGCGGCGCGC TGGTGGAGCC GCGGCCAGCA GCCCGGCGAT CCGGCGTTCA CCGGCGGCGA GGGCAGCGGC AAGGTCTGGC GCGACGAAGG CGCCTGTCTC TGA
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Protein sequence | MPIGDALTAN MAQVWRSNAA KISAYAPSVV PVDDERATHV LHEGFSLARA DSWKHFVVDV PAGTRRLAFG ITSGPRHEPT GRTAIYLKRD GRPSETDFDH RSREGVVAAL GVHEEAGGRW YVSVKGNNAD IDDLILDGHA FAVDSDSVEA RYLRLVVESE ASGKGGASAA EIQLADSRSR LLDPRNWRIH SVSSAEGARG AAANAIDGDP KTFWASAAGA GFPHEMIIDL GRDSRFSHLR YLPRQDNSQV GNIKGYRLYA SDNPYGGWVE VADGSFAADN KLKIQVLKPK ESNLPPLAQI DGKAEAEAGE RVVLDASASS DPQGAALSYA WTVSPALDME LDGPRLSFVA PSLAQDTPYR FTLTLDNGKQ RVTRDHEVKV KAAQDASCRP AWMRNKAYLS GDMVQHGGRQ YYARWWTQGQ EPGNPNFTGG DGSGKVWRDD GPCQQGEVPP PLAQISGKTD VAAGERVVLD ASGSSDPNGL ELSYQWSVSP ALAFEADGAR LSFVAPKAPQ DSRYTFSLTL GNGSHSVRQD HVVRVAAEQP GATCGRSWNA STAYVGGDRV TYGGRQYAAR WWSRGQQPGD PAFTGGEGSG KVWRDEGACL
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