Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4045 |
Symbol | |
ID | 5354758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4181521 |
End bp | 4182189 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640813095 |
Product | ABC transporter permease |
Protein accession | YP_001349399 |
Protein GI | 152987811 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGACT TCAGTGGAAT CGTTCCCGCC CTGCCGAGCC TCTGGGAAGG CATGCTGATG ACCCTCAAGC TGATGGTCCT CGGCGTCCTC GGCGGCGTCG CGCTGGGTAC CGTGCTGGCG CTGATGCGGC TGTCGAGCAG CAAGCTGCTG TCGAACATCG CCGGCTTCTA CGTCAACTAC TTCCGCTCGA TCCCGCTGCT GCTGGTGATC ACCTGGTTCT ACTTCGCGGT GCCTTTCATC CTGCGCTGGA TCACCGGCGA GGACACCCCG GTGGGGGCGT TCACCTCCTG CCTGGTGGCC TTCATGATGT TCGAGGCGGC CTATTACTGC GAGATCGTCC GCGCCGGCAT CCAGGCCATC CCGAAAGGCC AGATGGGCGC CGCCCAGGCA CTGGGCATGA CCTACGGGCA GACCATGCGC CTGGTGATCC TGCCGCAGGC GTTCCGCAAG ATGACCCCGC TGCTGCTGCA ACAGAGCATC ATCCTGTTCC AGGACACCTC GCTGGTCTAT ACCGTCGGCC TGATGGACTT CCTCAATTCG GCCCGTTCGC GCGGCGACAT CATCGGCCAG GCCAACGAGT TCCTGATTTT CGCCGGCCTG GTCTACTTCG TCGTAAGCTT CACCGCCTCG TTCGCCGTCA AACGTCTGCA GAAAAGGTTA ACCGTATGA
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Protein sequence | MMDFSGIVPA LPSLWEGMLM TLKLMVLGVL GGVALGTVLA LMRLSSSKLL SNIAGFYVNY FRSIPLLLVI TWFYFAVPFI LRWITGEDTP VGAFTSCLVA FMMFEAAYYC EIVRAGIQAI PKGQMGAAQA LGMTYGQTMR LVILPQAFRK MTPLLLQQSI ILFQDTSLVY TVGLMDFLNS ARSRGDIIGQ ANEFLIFAGL VYFVVSFTAS FAVKRLQKRL TV
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