Gene PSPA7_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_4023 
Symbol 
ID5355426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp4163006 
End bp4164439 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content70% 
IMG OID640813072 
Productputative transporter 
Protein accessionYP_001349376 
Protein GI152985365 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.343891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAGCC CCGCCCTGCC CCTTTCCCGT GGCTTGCGCA TCCGCGCCGA ACTCAAGGAA 
CTGCTGACCC TCGCCGCGCC GATCATGATC GCGCAGCTGG CGACCACCGC CATGGGCTTC
GTCGACGCGG TGATGGCCGG CCGCGCCAGC CCGCATGACC TGGCGGCGGT GGCGCTGGGC
AACTCGATCT GGATCCCGAT GTTCCTGCTG ATGACCGGCA CCCTGCTCGC CACCACGGCC
AAGGTCGCCC AGCGCTACGG CGCCGGCGAC CAGCCCGGCA CCGGGCCGCT GGTGCGCCAG
GCGCTGTGGC TGGCGCTGCT GATCGGGCCG CTGTCGGGGG CGGTGCTGTG GTGGCTGTCG
GAACCGATCC TCGGGCTGAT GAAGGTGCGC CCGGAGCTGA TCGGGCCGAG CCTGCTGTAC
CTCAAGGGGA TCGCCCTGGG CTTCCCGGCG GCGGCGCTGT ACCACGTGCT GCGCTGCTAC
ACCAACGGCC TGGGGCGGAC CCGGCCGAGC ATGGTGCTGG GCATCGGCGG GCTGCTGCTG
AACATCCCGA TCAACTATGC GCTGATCTAT GGCCACTTCG GTATGCCGAA GATGGGCGGC
CCGGGTTGCG GCTGGGCCAC CGGCTCGGTG ATGTGGTTCA TGTTCCTCGG CATGCTGTTC
TGGGTGAACA AGGCTTCCAT CTACCGCGCC AGCCAGCTGT TCTCGCGCTG GGAGTGGCCG
GATCGCGCGA CCATCGGCCC GCTGGTGGCG GTCGGCCTGC CGATCGGCAT CGCGGTGTTC
GCCGAGTCGA GCATCTTCTC GGTGATCGCC CTGCTGATCG GCGGACTCGA CGAGAACGTG
GTGGCTGGCC ACCAGATCGC CCTGAACTTC AGCGCGCTGG TGTTCATGAT TCCCTATTCG
CTGGGGATGG CGGTGACCGT ACGGGTCGGC CACAACCTCG GCGCCGGCCT GCCGCGCGAC
GCGCGCTTCG CCGCCGGCGT GGGGATGGCC GCGGCGCTGG GCTACGCCTG CGTCTCGGCG
AGCCTGATGC TGTTGCTGCG CGAGCAGATC GCCGCGATGT ATTCGCCGGA CCCGGCGGTG
ATCGCCATCG CCGCCTCGCT GATCGTGTTC TCCGCGCTGT TCCAGTTCTC CGACGCCCTG
CAGGTCACCG CCGCCGGTGC CCTGCGCGGC TACCAGGACA CCCGGGTGAC GATGATCATG
ACCCTGTTCG CCTACTGGGG CATCGGCCTG CCGGTGGGCT ACAGCCTCGG CCTCACCGAC
TGGTTCCAGG AACCCAGCGG GCCGCGCGGC CTGTGGCAGG GCCTGGTGGT GGGCCTGACC
GGCGCCGCGA TCATGCTCTG CATCCGCCTG GCGCGCAGCG CGCGGCGCTT CATCCGCCAG
CACGAACGCC TGCAACGCGA GGACGCGGCG GCCGCCTCAG TCCTTGGCCG GTAG
 
Protein sequence
MNSPALPLSR GLRIRAELKE LLTLAAPIMI AQLATTAMGF VDAVMAGRAS PHDLAAVALG 
NSIWIPMFLL MTGTLLATTA KVAQRYGAGD QPGTGPLVRQ ALWLALLIGP LSGAVLWWLS
EPILGLMKVR PELIGPSLLY LKGIALGFPA AALYHVLRCY TNGLGRTRPS MVLGIGGLLL
NIPINYALIY GHFGMPKMGG PGCGWATGSV MWFMFLGMLF WVNKASIYRA SQLFSRWEWP
DRATIGPLVA VGLPIGIAVF AESSIFSVIA LLIGGLDENV VAGHQIALNF SALVFMIPYS
LGMAVTVRVG HNLGAGLPRD ARFAAGVGMA AALGYACVSA SLMLLLREQI AAMYSPDPAV
IAIAASLIVF SALFQFSDAL QVTAAGALRG YQDTRVTMIM TLFAYWGIGL PVGYSLGLTD
WFQEPSGPRG LWQGLVVGLT GAAIMLCIRL ARSARRFIRQ HERLQREDAA AASVLGR