| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4023 |
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| Symbol | |
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| ID | 5355426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4163006 |
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| End bp | 4164439 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640813072 |
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| Product | putative transporter |
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| Protein accession | YP_001349376 |
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| Protein GI | 152985365 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.343891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAGCC CCGCCCTGCC CCTTTCCCGT GGCTTGCGCA TCCGCGCCGA ACTCAAGGAA
CTGCTGACCC TCGCCGCGCC GATCATGATC GCGCAGCTGG CGACCACCGC CATGGGCTTC
GTCGACGCGG TGATGGCCGG CCGCGCCAGC CCGCATGACC TGGCGGCGGT GGCGCTGGGC
AACTCGATCT GGATCCCGAT GTTCCTGCTG ATGACCGGCA CCCTGCTCGC CACCACGGCC
AAGGTCGCCC AGCGCTACGG CGCCGGCGAC CAGCCCGGCA CCGGGCCGCT GGTGCGCCAG
GCGCTGTGGC TGGCGCTGCT GATCGGGCCG CTGTCGGGGG CGGTGCTGTG GTGGCTGTCG
GAACCGATCC TCGGGCTGAT GAAGGTGCGC CCGGAGCTGA TCGGGCCGAG CCTGCTGTAC
CTCAAGGGGA TCGCCCTGGG CTTCCCGGCG GCGGCGCTGT ACCACGTGCT GCGCTGCTAC
ACCAACGGCC TGGGGCGGAC CCGGCCGAGC ATGGTGCTGG GCATCGGCGG GCTGCTGCTG
AACATCCCGA TCAACTATGC GCTGATCTAT GGCCACTTCG GTATGCCGAA GATGGGCGGC
CCGGGTTGCG GCTGGGCCAC CGGCTCGGTG ATGTGGTTCA TGTTCCTCGG CATGCTGTTC
TGGGTGAACA AGGCTTCCAT CTACCGCGCC AGCCAGCTGT TCTCGCGCTG GGAGTGGCCG
GATCGCGCGA CCATCGGCCC GCTGGTGGCG GTCGGCCTGC CGATCGGCAT CGCGGTGTTC
GCCGAGTCGA GCATCTTCTC GGTGATCGCC CTGCTGATCG GCGGACTCGA CGAGAACGTG
GTGGCTGGCC ACCAGATCGC CCTGAACTTC AGCGCGCTGG TGTTCATGAT TCCCTATTCG
CTGGGGATGG CGGTGACCGT ACGGGTCGGC CACAACCTCG GCGCCGGCCT GCCGCGCGAC
GCGCGCTTCG CCGCCGGCGT GGGGATGGCC GCGGCGCTGG GCTACGCCTG CGTCTCGGCG
AGCCTGATGC TGTTGCTGCG CGAGCAGATC GCCGCGATGT ATTCGCCGGA CCCGGCGGTG
ATCGCCATCG CCGCCTCGCT GATCGTGTTC TCCGCGCTGT TCCAGTTCTC CGACGCCCTG
CAGGTCACCG CCGCCGGTGC CCTGCGCGGC TACCAGGACA CCCGGGTGAC GATGATCATG
ACCCTGTTCG CCTACTGGGG CATCGGCCTG CCGGTGGGCT ACAGCCTCGG CCTCACCGAC
TGGTTCCAGG AACCCAGCGG GCCGCGCGGC CTGTGGCAGG GCCTGGTGGT GGGCCTGACC
GGCGCCGCGA TCATGCTCTG CATCCGCCTG GCGCGCAGCG CGCGGCGCTT CATCCGCCAG
CACGAACGCC TGCAACGCGA GGACGCGGCG GCCGCCTCAG TCCTTGGCCG GTAG
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| Protein sequence | MNSPALPLSR GLRIRAELKE LLTLAAPIMI AQLATTAMGF VDAVMAGRAS PHDLAAVALG
NSIWIPMFLL MTGTLLATTA KVAQRYGAGD QPGTGPLVRQ ALWLALLIGP LSGAVLWWLS
EPILGLMKVR PELIGPSLLY LKGIALGFPA AALYHVLRCY TNGLGRTRPS MVLGIGGLLL
NIPINYALIY GHFGMPKMGG PGCGWATGSV MWFMFLGMLF WVNKASIYRA SQLFSRWEWP
DRATIGPLVA VGLPIGIAVF AESSIFSVIA LLIGGLDENV VAGHQIALNF SALVFMIPYS
LGMAVTVRVG HNLGAGLPRD ARFAAGVGMA AALGYACVSA SLMLLLREQI AAMYSPDPAV
IAIAASLIVF SALFQFSDAL QVTAAGALRG YQDTRVTMIM TLFAYWGIGL PVGYSLGLTD
WFQEPSGPRG LWQGLVVGLT GAAIMLCIRL ARSARRFIRQ HERLQREDAA AASVLGR
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