| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4021 |
|---|
| Symbol | |
|---|
| ID | 5355954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4161997 |
|---|
| End bp | 4162521 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640813071 |
|---|
| Product | RNA polymerase ECF-subfamily sigma-70 factor |
|---|
| Protein accession | YP_001349375 |
|---|
| Protein GI | 152984913 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.27293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGTTCG ATCCCGCCAA GCCGACCTTG CTGTCCACAC TGGTTCGTCA CTACGAGGAA
CTGGTCGACC ACATTCGCCG GCGCTTCGGC GACCGGGGCA TGGCGCGCGA GGTAGTGCAC
GACGTGTGCG TGCAGTTGCT CGAGCGTGAC GAGAAGGGCG ACGTCCACAC GCCCCTGGCG
CTGCTGCGGA AAATCTCCCA CGACACCGCC GTGAGCCGCT ATCGTAGCGA GCGCCGCCGC
GCGGCCTGGG TGGAAGCCGT CGCCGAGCTT CCCGAGGTCG CCTGCGCGGC GGCGACCCCG
GTGGGCCGGC ATGAGGCCGA GCGCGAGTTC CAGGCGCTGG TCGAGGCCAT CGCCGCGCTT
CCTCCTCGCT GCCAGGCCGT TTTCGTCATG CACAAGATCC ACGAGATTCC CCAGGCGCAA
GTCGCCGCCC GGCTCGGCAT TTCCATCAAG ACCGTGGAAA AGCACCTGCG TCTTGGATTG
ACGGCCTGCC GGGAACGCCT CGGGCGTGGC GAGGTACAGG CATGA
|
|---|
| Protein sequence | MPFDPAKPTL LSTLVRHYEE LVDHIRRRFG DRGMAREVVH DVCVQLLERD EKGDVHTPLA
LLRKISHDTA VSRYRSERRR AAWVEAVAEL PEVACAAATP VGRHEAEREF QALVEAIAAL
PPRCQAVFVM HKIHEIPQAQ VAARLGISIK TVEKHLRLGL TACRERLGRG EVQA
|
|---|
| |