Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4019 |
Symbol | |
ID | 5354584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4158630 |
End bp | 4161080 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640813069 |
Product | siderophore receptor |
Protein accession | YP_001349373 |
Protein GI | 152987734 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.752702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCATTTTT CCCTCCGCAG TCGCCACCTG CGCCCCTCAT TGCTCGCCAG CAGCCTGCTC CTCGCGGTGT CGGCCCAGGC CCAGGAAAAG CTCGACATGG ACCTGCCCGC CGCACCGCTC GGCCAGGCCA TCAATGCCCT CGCGCAGCAG TCCTCGGTAC AGATCCTCTT CGCCGGCGAC CTCGGCACCG GCCGCCAGGC GCCCGCGCTG AAGGGTCGTT ACACCCCCGA GGAGGCGCTG CGCCAGTTGC TCCGGGACAG CGGCCTGCAG GCACAGACCA GGGACGAACA TACCTTCATC GTCGTACCGG CCGGCGAAGC CCGCAAAGCC GCCGCGCCCG TTCCGCAAGC CCAGAGCGAA CCGCTGGACA TGGAGCAGAT GGAAATCACC GCCTCGCGCA CCAGCAGCGA CCTGGTTTCC GCCACCCGCC AGTCCACCGT CATCGAGCAT GCCCAGCTGG AAGAGCTGCG CCAGGGCTCC GACAGCCTGG CCACCGTGCT GGCCAAGGCG GTGCCGGGGA TGTCCGACTC CAGCCGCACC ATCACCGAAT ACGGCCAGAC CCTGCGCGGG CGCAGCATGC TGGTGATGGT CGACGGCGTG CCGCTGAACA CCAACCGCGA CTCCTCGCGC AACCTGGCCA ACATCGACCC GGCGCTGATC GAGCGGATCG AGGTCATCCG TGGCAGCAGC GCCATCTACG GCAGTGGCGC CACCGGCGGG ATCATCTCCA TCACCACGCG TCCGGCCGGC GGCGAGAACC GCGCGGAAAC CCGCCTCAGC GCCACCTCGC CGCTGACCCG CCTGGGCAGC GATGGCCTCG GCGGCCAGTT CCAGCAGTAC TTCGCCGGCT CCCTGGGGGC GCTGGACTAT TCGTTCGACT TCGGTACCCG CCACGTCGGC GCTTCCTACG ATGCCCATGG CGACCGTATC GCCCCGGAAC CCAGCCAGGG CGACCTGTTC GACTCGAACG TCTACAACAT CGGCGGCAAG CTCGGCCTGC GCATCGACGA GAACCAGCGC GTGCAGCTCG CCCTCAGCCA CTACGACGCC CGCCAGGACA CCGACTACGC CACCGACCCG AGGGTCGCCA GACTGCCGCC GGGCTCGGTC CCGGCCAACG CGATCAAGGG CCTGGAGCTG GACGAGCAGA ACCGCATCCG CAACACCCTG GCGAACCTCG AGTACGAGAA CCTCGACATC CTCGGCAGCC GGCTCTCCGC GCAGCTCTAC TACCGCGACT ATTTCACTCG CTTCACTCCG TTCGACGCCC GCGCCGTCTC CACCCGTGGC GGCAACGTCG ACCAGATCAT GCAGAACAGC GAAGTGTTCG GCAGCCGCCT GACCCTGCGC ACGCCGCTGG GCGAGAGCGG CAATACCGAA CTGGTCTGGG GCGGCGACTA CAACCAGGAA CGCAGCGACA TGCCGCTCGA CGTGTTCGAC CCGGCGGCCT ACGACGCCAG CGGCGGGCTG GTCTTCGACA AGATCGGCAA GCTCACCTAC ATGCCGCCGC TACGGACTCG CAGCGCCGGC GCGTTCGCCC AGTTGCAGCA TCGCTTCGAC GAACACTGGT CGATCGACGG TGGCCTGCGC TACGAATATT CCACCGCCGA ATTCGACGAC TTCATCCCGC TCTCCGAGTC CAAGGCCGCC TCGCCGGTGG CCGTCAAGGG CGGCGACCTC GACTACGATG CGGTGCTGTC GAACCTCGGC ATCGTCTATT CGCCGGTGGC CGGCCAGGAG ATCTACGCCT CCTTCAGCCA GGGCTTCCAA TTGCCCGACG TCGGCATCCA ACTGCGCAAC GCCCGCCGTG GCTTCGATAT CGGCTCGTCG AACCTCGAAC CGGTGAAGAC CAACAACTAC GAACTCGGCT GGCGCGGTGC CATCGGCGGC AATACCCTGG GCAGCCTGGC GCTGTTCTAC ACCACCTCCA AGCTGGGCGA CGTGCAGAGT TTCAACAACG GCCTGATCCT CACCCGCACC AAGGAACGCA TCTACGGCGT CGAGGCCAGC GCCGACTGGC TCAGCGACGA CGAAGTCTGG GGCGCGGGCG GCAGCGCCAC CTGGATGCGC GGGCGCGAGA AGCCGGACGG CAAGGACTGG CAGAACATGA CCGGCTACCG TGTGCCGCCG CTGAAGCTGA CCGCCTACCT GCAATACAAG CCGGATGCCG ACTGGAACAA CCGTCTGCAG GCCACCTTCT TCGACTCCAA GGACTACCGT CTCGACGGCG TGGAAAGCTT CGGCCGCCGC CAGGTCAGCA CCTACACCAC GGTCGACCTG GTCAGCCAGT ACCGCATCAC CCCCGACGAC CAGTTGAGCC TGGGCATCCA GAACCTGTTC AACCGCGACT ACTACCCGCT CTACAGCCAA CTGCTGCGCA ACAACAACAA CACCAGCCAC CTGCCGGCGC CGGGCACGGT GCTGACGGCG AGCTATACGC ACAACTGGTG A
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Protein sequence | MHFSLRSRHL RPSLLASSLL LAVSAQAQEK LDMDLPAAPL GQAINALAQQ SSVQILFAGD LGTGRQAPAL KGRYTPEEAL RQLLRDSGLQ AQTRDEHTFI VVPAGEARKA AAPVPQAQSE PLDMEQMEIT ASRTSSDLVS ATRQSTVIEH AQLEELRQGS DSLATVLAKA VPGMSDSSRT ITEYGQTLRG RSMLVMVDGV PLNTNRDSSR NLANIDPALI ERIEVIRGSS AIYGSGATGG IISITTRPAG GENRAETRLS ATSPLTRLGS DGLGGQFQQY FAGSLGALDY SFDFGTRHVG ASYDAHGDRI APEPSQGDLF DSNVYNIGGK LGLRIDENQR VQLALSHYDA RQDTDYATDP RVARLPPGSV PANAIKGLEL DEQNRIRNTL ANLEYENLDI LGSRLSAQLY YRDYFTRFTP FDARAVSTRG GNVDQIMQNS EVFGSRLTLR TPLGESGNTE LVWGGDYNQE RSDMPLDVFD PAAYDASGGL VFDKIGKLTY MPPLRTRSAG AFAQLQHRFD EHWSIDGGLR YEYSTAEFDD FIPLSESKAA SPVAVKGGDL DYDAVLSNLG IVYSPVAGQE IYASFSQGFQ LPDVGIQLRN ARRGFDIGSS NLEPVKTNNY ELGWRGAIGG NTLGSLALFY TTSKLGDVQS FNNGLILTRT KERIYGVEAS ADWLSDDEVW GAGGSATWMR GREKPDGKDW QNMTGYRVPP LKLTAYLQYK PDADWNNRLQ ATFFDSKDYR LDGVESFGRR QVSTYTTVDL VSQYRITPDD QLSLGIQNLF NRDYYPLYSQ LLRNNNNTSH LPAPGTVLTA SYTHNW
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