Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3987 |
Symbol | |
ID | 5358956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4130303 |
End bp | 4130917 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640813037 |
Product | hypothetical protein |
Protein accession | YP_001349341 |
Protein GI | 152985235 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.178555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGAAA CCTCGCTCTT CGTCGCCACC CTCGCCACCC TCGGCATGCT CTCGCCCGGC CCGGACTTCT TCCTGGTGAT CCGCAACGCA GCGCGCTACC AGCGCTCGGC GGCGATGATG ACCTCGCTGG GAGTGACCCT CGGGGTGGCC ACCCACATGA CCTACTGCGT CGCCGGCCTG GCCGTGGTGA TCACCACCAC GCCATGGCTG TTCAACGCGC TGAAGTACAC CGGCGCGGTC TACCTGATCT GGATCGGCAT CCAGGCCCTG CGCGCGCGCG GCGGCGGCCG CGTCGACCTG GCGCTCGGCG AGACGCAGCG CATCGGCCAC TGGAGCGCAT TCCTCCAGGG CTACCTGTGC AACCTGCTCA ACCCCAAGGC CACGCTGTTC TTCCTCGCCG TGTTCACCCA GGTGCTGAGC CTGGACTCCA GCTTCGCCGA GAAGCTCTGG TACGCCGGCA TCATCGTCGG CCTCGCCGCG CTCTGGTGGC CGCTGCTGGT GGTGCTGATC CAGAGCGCGG TGGTTCGTCG CGGCCTGGCC AGGGCCCAGG GGGTGGTCGA CAAGCTGCTC GGCGGCCTGC TGATCGCCCT CGGGGTCAAG GTCGCCCTGA GTTGA
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Protein sequence | MLETSLFVAT LATLGMLSPG PDFFLVIRNA ARYQRSAAMM TSLGVTLGVA THMTYCVAGL AVVITTTPWL FNALKYTGAV YLIWIGIQAL RARGGGRVDL ALGETQRIGH WSAFLQGYLC NLLNPKATLF FLAVFTQVLS LDSSFAEKLW YAGIIVGLAA LWWPLLVVLI QSAVVRRGLA RAQGVVDKLL GGLLIALGVK VALS
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