| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3978 |
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| Symbol | |
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| ID | 5355012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4121745 |
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| End bp | 4123331 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640813028 |
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| Product | transmembrane transport protein |
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| Protein accession | YP_001349332 |
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| Protein GI | 152985319 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAC CCGCCGCCTC CCCCTGGAGT CCCCTGCGCC AGACCACCTT CCGCTGGCTG
TGGCTGGCCA GCATCGCCTC CAACATCGGC ACCTGGATGC ACGAGGTGGG CGCCGGCTGG
CTGATGACCT CGCTCTCCGC CAGCCCGCTG AACGTGGCGC TGGTGCAGGT CGCCGGCTCG
CTGCCGATGT TCTTCCTGGC CCTGCCGGCC GGCGCCCTCG CCGATATCGT CGACAAGCGG
CGCTACCTGC TCGGCGTGCA ATTGTGGATG GCGTTGGTGG CCACCCTGCT GGCCAGCCTC
ACCCTGCTCC AGTCGACCAG CGTCTGGCTG CTGCTCGGCC TGACCCTGTG CATGGGCATC
GGCACCGCGC TGATGATGCC GGCCTGGAGC GCCACCACTC CGGAACTGGT GGGCAAGGAC
GAACTGCCGG CGGCGGTGGC GCTGTCCAGT GTCGGGGTCA ACCTGGCGCG GGCGGTCGGC
CCGGCCATCG CCGGGGTGCT GGTGAGCCTG GTCGGCCCCT GGCTGACTTT CGCCCTCAAC
GCCCTCTCCT TCTTCGCGGT GATCGCCGTG CTGCTGGCCT GGAAACGCGA GGCCGTGCCC
TCGGTGCTGC CGGCGGAACG CCTGTTCGGC GCCCTGCGCG CCGGCTGGCG CTACAGCCGC
AGTTCAAGGC CGCTGCAAGC GGTGCTGGTG CGCGCGGTGG CGTTCTTCCT CGGCGCCAGC
GCCGGCATGT CGCTGCTGCC GCTGATCGTG CGCGGCGACC TGCAGGGCAA CGCCATGGAC
TTCGGCCTGC TGCTGGGCAG CGTCGGCGTC GGCGCGGTGC TCGGCGCCGC GTTCCTGCCG
CGCCTGCGCG AACGCCTCGG CAGCGACCGC CTGGTGCTGC TCTCCAGCGT GCTCTACGCG
CTGGTGCTGG TGGCCCTGGC GCTGCTGCGC AACCTCTATT TGCTGGTACC GGTGATGCTG
CTCAGCGGCG TGGCATGGAT CGCCGTGCTT TCCAGCCTGC AGGTCGCCGC GCAGACCTCG
GTGCCGGCCT GGGTCCGCGC CCGCGCGCTG GCGGTCTACA TCCTGGTGTT CTTCGGCAGC
ATGGCCGCCG GCGGCGCCCT GTGGGGGCTG CTCGCCAGCC ACCTGTCGAT GACCTTCGCC
CTGCTCTGCG CCAGCGCCGC GCTGCTGCTC GGCCTGTTCG CGTCGCTGCG CTGCCATCTG
CCGGTCACCG CGGCCGAGGA CCTCGCGCCG TCGCTGCACT GGCCGGCACC ACTGGTCGAC
GAAGAGGTGG ACCGGGAACG CGGCCCGGTG CTGGTCACCC TCGAGTACGA CATCGACCCG
CAGGACGCCG CGGCATTCCA GGCGGCGATG GTCGAGGTGC GCGCCATGCG TCGGCGCAAC
GGCGCGGTGT CCTGGGGACT GGTCCAGGAC AGCGGCAACC GTCGCCTGTG GCTGGAGTTC
TTCATCGATG AATCCTGGCT GGAACACCTG CGCCACCACC AGCGGGTGAC CCGCGGCGAG
TTGCGGGTCG AGGCCGCCGC CCGGCGCTTC CAGAGCGCCG GCGTCGAGGT GCGTATCCGT
CATTACCTGC ACGGCGCGGC GCGCTAG
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| Protein sequence | MNAPAASPWS PLRQTTFRWL WLASIASNIG TWMHEVGAGW LMTSLSASPL NVALVQVAGS
LPMFFLALPA GALADIVDKR RYLLGVQLWM ALVATLLASL TLLQSTSVWL LLGLTLCMGI
GTALMMPAWS ATTPELVGKD ELPAAVALSS VGVNLARAVG PAIAGVLVSL VGPWLTFALN
ALSFFAVIAV LLAWKREAVP SVLPAERLFG ALRAGWRYSR SSRPLQAVLV RAVAFFLGAS
AGMSLLPLIV RGDLQGNAMD FGLLLGSVGV GAVLGAAFLP RLRERLGSDR LVLLSSVLYA
LVLVALALLR NLYLLVPVML LSGVAWIAVL SSLQVAAQTS VPAWVRARAL AVYILVFFGS
MAAGGALWGL LASHLSMTFA LLCASAALLL GLFASLRCHL PVTAAEDLAP SLHWPAPLVD
EEVDRERGPV LVTLEYDIDP QDAAAFQAAM VEVRAMRRRN GAVSWGLVQD SGNRRLWLEF
FIDESWLEHL RHHQRVTRGE LRVEAAARRF QSAGVEVRIR HYLHGAAR
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