| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3971 |
|---|
| Symbol | |
|---|
| ID | 5355370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 4115861 |
|---|
| End bp | 4116679 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640813021 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_001349325 |
|---|
| Protein GI | 152985198 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.347316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTCGCA ACAGTGAGAC GACTCCCGAT CCGGACAAGG TCATCCATAT TCCTTGTGCC
GATTCGTTTT CCGTCATCGT TCAGTTGCGC GACTTCAACT CCCACCGTCT CTGGAATGGA
AAAAAACTGG TATTCGATGG CGGTCATCCG CAGAAAAGTA TCTCCATCGC CTATCTTGGC
GATGAAATAA AGTGCCAGCA CCGGGCAACT TACGACAATG TCCGCTTCAT GTTGCCGCGC
GCTTCGATAA AGGAGTTTCT TTACGAAGAG GGGCAGCGCA TGTCCGCCGA ACCGGAGCGG
ATCATCGGCG TCGACGACCC GGTGGTCTAT CACCTGGCCC TGGCGCTGCT GCCCAGCTTC
GCCAGGGCGG GGGAGCGCAA CGAGCTGTTC ATCGAACAGG TCATGCTGGC GCTATTGACC
CACGTCCAGG ATCGCTTCGC CTCGACCCCG GTCCCGGCCT GTACTGGCAA GGGCCTGGCG
CCCTGGCAAT TGCGCAGGGC CAAGGAGCTG ATCGCCGGGC ATCTGAGCGA GGGCGTATCG
GTGGCGCGCC TGGCCGAGGA GTGCGGCCTC TCGCGCAGCT ATTTCACCAA GGCCTTCAAG
TGCAGCACCG GTGTGTCGCC CCACGAATGG CTGATGCGCA TGCGCGTCGA CAGGGCCAAG
GAGCTGATGC TGGGCAGCGA CGAACCGCTG TCGCAGATCG GCGTCGCCTG CGGCTTTTCC
GACCAGCCGC ATTTCTCGCG GATCTTTCTC CGGCTGGCCG GCGCCTCGCC CTCGACCTGG
CGCCGGGTCA AGCGGCAGCG CGCCGACGCA GCGCTCTGA
|
|---|
| Protein sequence | MIRNSETTPD PDKVIHIPCA DSFSVIVQLR DFNSHRLWNG KKLVFDGGHP QKSISIAYLG
DEIKCQHRAT YDNVRFMLPR ASIKEFLYEE GQRMSAEPER IIGVDDPVVY HLALALLPSF
ARAGERNELF IEQVMLALLT HVQDRFASTP VPACTGKGLA PWQLRRAKEL IAGHLSEGVS
VARLAEECGL SRSYFTKAFK CSTGVSPHEW LMRMRVDRAK ELMLGSDEPL SQIGVACGFS
DQPHFSRIFL RLAGASPSTW RRVKRQRADA AL
|
|---|
| |