Gene PSPA7_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3960 
Symbol 
ID5353662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp4103712 
End bp4105781 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content65% 
IMG OID640813010 
Producthypothetical protein 
Protein accessionYP_001349314 
Protein GI152985978 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTCT CCCAACATAC CCGCCTGGTC CACGTGGATT CCCCTTTGGG CCCCGAGGTC 
CTGCAACTGC AACGGCTGGA AGGCCGCGAA GAGTTGGGCA GGCTGTTCAA CCACGAGCTC
GAGCTGGTTT CGAGCAATCA CGCCCTGCCC CTGGACGCCC TGCTGGGCAA GCCGATGAGC
CTGGCACTGG AATTGCCCGG CGGCATCCGG CGGCATTTCC ACGGCATCGT CGCGCGCTGC
AGCCAGGGTG CCGGCAGCGG CCAGTTCGCC AGCTACCAGG TCACCCTGCG GCCCTGGCTG
TGGCTGCTCA CGCGCACCTC CGACTGTCGC ATCTTCCAGA ACCAGAAGGT CCCGGACATC
ATCAAGCAGG TGTTCCGCGA TCTCGGCTTC TCCGACTTCG AGGATGCCCT GACACGCCCC
TACCGCGAGT GGGAGTACTG CGTGCAGTAC CGCGAGACCA GCTTCGACTT CGTCAGCCGG
CTGATGGAGC AGGAGGGCAT CTACTACTGG TTCCGCCACG AGAAGAAGCG CCACATCCTG
GTCCTCTCCG ACGCCTACGG TGCGCACCAG AGCCCGGTCG GCTACGCCAG CGTGCCTTAC
TACCCGCCGA CCCTCGGCCA CCGCGAGCGC GACCATTTCT TCGACTGGCA CGTGGCGCGC
GAGGTCCAGC CCGGTTCGCT GAGCCTCAAC GACTACGATT TCCAGCGTCC CGGCACCCGC
CTGGAGGTGC GCTCCAACGT GGGGCGCGCC CATGCGGCGG CGGACTACCC GCTGTACGAC
TACCCCGGGG AATACGTGCA GAGCCAGGAT GGCGAACACT ACGCGCGGAC CCGCATCGAA
GCGATCCAGA CCCAGCACGA GCGGGTACGC CTGCGCGGTT GCGCCAGGGG CATCGGCTCC
GGGCACCTGT TCCACCTGAG CAACTATCCG CGGCTCGACC AGAACCGCGA GTACCTGGTG
GTGGCGGCGG AATACCGGGT GGTCCAGGAG CTTCTCGAGA CCGGCAATGG CGGCGCCGGA
GCGCAGTTCG AGAGCGAACT GGACTGCATC GATGCCGCCC AGCCGTTCCG GCCGTTGCCG
CTGACGCCGG TGCCGGTGGT GCGCGGCCCG CAGACCGCGG TGGTGGTCGG GCCCAAGGGC
GAGGAGATCT GGACCGACCA GTACGGCCGG GTCAAGGTGC ACTTCCACTG GGACCGCCAC
GACCAGTCGA ACGAGAACAG CTCCTGCTGG ATGCGCGTAT CCCAGGCCTG GGCCGGGAAG
AACTGGGGCT CGATCCAGAT CCCGCGGATC GGCCAGGAGG TGATCGTCAG CTTCCTCGAA
GGCGACCCGG ACCGGCCGAT CATCACCGGG CGGGTCTACA ACGCCGAGCA GACAGTGCCT
TACGAACTGC CGGCGAACGC CACCCAGAGC GGCACCAAGA GCCGTTCGAG CAAGGGCGGC
ACGCCGGCCA ACTTCAACGA GATCCGCATG GAGGACAAGA AGGGCGCCGA GCAGCTGTAC
ATCCACGCGG AGAAGAACCA GGACATCGAG GTCGAGAACG ACGAGACCCA CTGGGTCGGT
CACGACCGCA GCAAGACCAT CGACCACGAC GAGACCGTGC ACGTGAAGCA CGATCGCACC
GAGACGGTGG ACAACAACGA GACCATCACC GTGCATGCCA ACCGCAGCAA GACGGTGGAC
CGCAACGAAA CGGTGAAGAT CGGCATGAAC AAGAGCGAGA CCATCCTCAT GGCCTCGCTG
CAGAACGTCG GCATGGGGCG CATGGAAAAC GTCGGCCTCG GCTACAGCCT CAATGTCGGC
ATGATGATGA ACACGGTGGT CGGGTTGAAC CAGAGCACCC AGGTGATGAA GAAGAAGACC
CTGTCGGTGG GCGACAGCTA CGAAGTGAGC GTGGGCGGCA GCGACGACGG GTCGAAGATC
GGCCTGGACG GCAGGAGCAT CGTCCTCGGC AGCCAGCGCA TCGAGCTGAC CGCCGACCGC
GAGATCCTCC TGCGCTGCGG GCAGAGCACC ATCCGCATCA CCCCGGCGGA GATCGAGATC
CTCTCGCCGA ACGTCGATAT CAACTGTTGA
 
Protein sequence
MLFSQHTRLV HVDSPLGPEV LQLQRLEGRE ELGRLFNHEL ELVSSNHALP LDALLGKPMS 
LALELPGGIR RHFHGIVARC SQGAGSGQFA SYQVTLRPWL WLLTRTSDCR IFQNQKVPDI
IKQVFRDLGF SDFEDALTRP YREWEYCVQY RETSFDFVSR LMEQEGIYYW FRHEKKRHIL
VLSDAYGAHQ SPVGYASVPY YPPTLGHRER DHFFDWHVAR EVQPGSLSLN DYDFQRPGTR
LEVRSNVGRA HAAADYPLYD YPGEYVQSQD GEHYARTRIE AIQTQHERVR LRGCARGIGS
GHLFHLSNYP RLDQNREYLV VAAEYRVVQE LLETGNGGAG AQFESELDCI DAAQPFRPLP
LTPVPVVRGP QTAVVVGPKG EEIWTDQYGR VKVHFHWDRH DQSNENSSCW MRVSQAWAGK
NWGSIQIPRI GQEVIVSFLE GDPDRPIITG RVYNAEQTVP YELPANATQS GTKSRSSKGG
TPANFNEIRM EDKKGAEQLY IHAEKNQDIE VENDETHWVG HDRSKTIDHD ETVHVKHDRT
ETVDNNETIT VHANRSKTVD RNETVKIGMN KSETILMASL QNVGMGRMEN VGLGYSLNVG
MMMNTVVGLN QSTQVMKKKT LSVGDSYEVS VGGSDDGSKI GLDGRSIVLG SQRIELTADR
EILLRCGQST IRITPAEIEI LSPNVDINC