Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3960 |
Symbol | |
ID | 5353662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4103712 |
End bp | 4105781 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640813010 |
Product | hypothetical protein |
Protein accession | YP_001349314 |
Protein GI | 152985978 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTCT CCCAACATAC CCGCCTGGTC CACGTGGATT CCCCTTTGGG CCCCGAGGTC CTGCAACTGC AACGGCTGGA AGGCCGCGAA GAGTTGGGCA GGCTGTTCAA CCACGAGCTC GAGCTGGTTT CGAGCAATCA CGCCCTGCCC CTGGACGCCC TGCTGGGCAA GCCGATGAGC CTGGCACTGG AATTGCCCGG CGGCATCCGG CGGCATTTCC ACGGCATCGT CGCGCGCTGC AGCCAGGGTG CCGGCAGCGG CCAGTTCGCC AGCTACCAGG TCACCCTGCG GCCCTGGCTG TGGCTGCTCA CGCGCACCTC CGACTGTCGC ATCTTCCAGA ACCAGAAGGT CCCGGACATC ATCAAGCAGG TGTTCCGCGA TCTCGGCTTC TCCGACTTCG AGGATGCCCT GACACGCCCC TACCGCGAGT GGGAGTACTG CGTGCAGTAC CGCGAGACCA GCTTCGACTT CGTCAGCCGG CTGATGGAGC AGGAGGGCAT CTACTACTGG TTCCGCCACG AGAAGAAGCG CCACATCCTG GTCCTCTCCG ACGCCTACGG TGCGCACCAG AGCCCGGTCG GCTACGCCAG CGTGCCTTAC TACCCGCCGA CCCTCGGCCA CCGCGAGCGC GACCATTTCT TCGACTGGCA CGTGGCGCGC GAGGTCCAGC CCGGTTCGCT GAGCCTCAAC GACTACGATT TCCAGCGTCC CGGCACCCGC CTGGAGGTGC GCTCCAACGT GGGGCGCGCC CATGCGGCGG CGGACTACCC GCTGTACGAC TACCCCGGGG AATACGTGCA GAGCCAGGAT GGCGAACACT ACGCGCGGAC CCGCATCGAA GCGATCCAGA CCCAGCACGA GCGGGTACGC CTGCGCGGTT GCGCCAGGGG CATCGGCTCC GGGCACCTGT TCCACCTGAG CAACTATCCG CGGCTCGACC AGAACCGCGA GTACCTGGTG GTGGCGGCGG AATACCGGGT GGTCCAGGAG CTTCTCGAGA CCGGCAATGG CGGCGCCGGA GCGCAGTTCG AGAGCGAACT GGACTGCATC GATGCCGCCC AGCCGTTCCG GCCGTTGCCG CTGACGCCGG TGCCGGTGGT GCGCGGCCCG CAGACCGCGG TGGTGGTCGG GCCCAAGGGC GAGGAGATCT GGACCGACCA GTACGGCCGG GTCAAGGTGC ACTTCCACTG GGACCGCCAC GACCAGTCGA ACGAGAACAG CTCCTGCTGG ATGCGCGTAT CCCAGGCCTG GGCCGGGAAG AACTGGGGCT CGATCCAGAT CCCGCGGATC GGCCAGGAGG TGATCGTCAG CTTCCTCGAA GGCGACCCGG ACCGGCCGAT CATCACCGGG CGGGTCTACA ACGCCGAGCA GACAGTGCCT TACGAACTGC CGGCGAACGC CACCCAGAGC GGCACCAAGA GCCGTTCGAG CAAGGGCGGC ACGCCGGCCA ACTTCAACGA GATCCGCATG GAGGACAAGA AGGGCGCCGA GCAGCTGTAC ATCCACGCGG AGAAGAACCA GGACATCGAG GTCGAGAACG ACGAGACCCA CTGGGTCGGT CACGACCGCA GCAAGACCAT CGACCACGAC GAGACCGTGC ACGTGAAGCA CGATCGCACC GAGACGGTGG ACAACAACGA GACCATCACC GTGCATGCCA ACCGCAGCAA GACGGTGGAC CGCAACGAAA CGGTGAAGAT CGGCATGAAC AAGAGCGAGA CCATCCTCAT GGCCTCGCTG CAGAACGTCG GCATGGGGCG CATGGAAAAC GTCGGCCTCG GCTACAGCCT CAATGTCGGC ATGATGATGA ACACGGTGGT CGGGTTGAAC CAGAGCACCC AGGTGATGAA GAAGAAGACC CTGTCGGTGG GCGACAGCTA CGAAGTGAGC GTGGGCGGCA GCGACGACGG GTCGAAGATC GGCCTGGACG GCAGGAGCAT CGTCCTCGGC AGCCAGCGCA TCGAGCTGAC CGCCGACCGC GAGATCCTCC TGCGCTGCGG GCAGAGCACC ATCCGCATCA CCCCGGCGGA GATCGAGATC CTCTCGCCGA ACGTCGATAT CAACTGTTGA
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Protein sequence | MLFSQHTRLV HVDSPLGPEV LQLQRLEGRE ELGRLFNHEL ELVSSNHALP LDALLGKPMS LALELPGGIR RHFHGIVARC SQGAGSGQFA SYQVTLRPWL WLLTRTSDCR IFQNQKVPDI IKQVFRDLGF SDFEDALTRP YREWEYCVQY RETSFDFVSR LMEQEGIYYW FRHEKKRHIL VLSDAYGAHQ SPVGYASVPY YPPTLGHRER DHFFDWHVAR EVQPGSLSLN DYDFQRPGTR LEVRSNVGRA HAAADYPLYD YPGEYVQSQD GEHYARTRIE AIQTQHERVR LRGCARGIGS GHLFHLSNYP RLDQNREYLV VAAEYRVVQE LLETGNGGAG AQFESELDCI DAAQPFRPLP LTPVPVVRGP QTAVVVGPKG EEIWTDQYGR VKVHFHWDRH DQSNENSSCW MRVSQAWAGK NWGSIQIPRI GQEVIVSFLE GDPDRPIITG RVYNAEQTVP YELPANATQS GTKSRSSKGG TPANFNEIRM EDKKGAEQLY IHAEKNQDIE VENDETHWVG HDRSKTIDHD ETVHVKHDRT ETVDNNETIT VHANRSKTVD RNETVKIGMN KSETILMASL QNVGMGRMEN VGLGYSLNVG MMMNTVVGLN QSTQVMKKKT LSVGDSYEVS VGGSDDGSKI GLDGRSIVLG SQRIELTADR EILLRCGQST IRITPAEIEI LSPNVDINC
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