Gene PSPA7_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_3904 
Symbol 
ID5358984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp4040801 
End bp4043068 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content72% 
IMG OID640812954 
ProductTPR domain-containing protein 
Protein accessionYP_001349258 
Protein GI152985242 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.041716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATGC CCTTCGTGCC CGACCGGCGA GACGCCCACC CACCCCTTCC CCGCCGCCGC 
GCCAGCTACT GCGCGGGCCT GCTCTGGAGC GCGGCGCTGG CGTGGTCCCC AGCGATCGCG
GCCGGCGCGA CCGCCGGCCT GGTCGACGAA GGCACCTGCC AGGCCTGCCA CGCCCGGCAG
AGCGAACAGT GGCGCGGCTC GCACCACCAG TTGGCGATGC AGCCGGCCAG CCCCGGGAGC
GTCCTCGGCG ACTTCTCCGA CGTGCGTTTC AGCCACGCCG GGGAAACCAC CCGCTTCTAC
CGCAAGGGTG ACGCGTACTG GGTGAATACG CCCGGCGCCG ACGGCAGCAA CGCCGACTTC
CAGGTGCGCT ACACCTTCGG CGTGGAGCCG CTCCAGCAAT ATCTGCTGGA CACCGGCGGC
GGACAACTGC AAGCCCTGGG CGTGGCCTGG GATACCCGAC GCAAGGCCTG GTTCCACCTG
TACCCGGACG AACGCGTGGA TGCCCGCCAT CCGCTGCACT GGAGCAAGCC ACAGCAGAAC
GCCAACTTCA TGTGCATGGA GTGCCACAAC ACCGGTTTCG AACGCAATCA CGACGCCGCC
AGCGGCCGCT TCGACAGCCA GTGGCTGGCT ACCGGCGTCG GTTGCCAGAG TTGCCACGGT
CCGGCCGCCG CGCACCTGGC CTGGACCCGC CAGCCCGATC GGAGGCAGGC GCACGCCGGC
TTCGCCGGGA GCCTGGCGGC CACCGCCAAC CGCGCCCAGG TGGAAAGCTG TGCGCGCTGC
CATTCGCGGC GCTCGCCGCT AGGCGACGGC TTCGATGCGA CGGCGCGCCT GCTCGACGAC
TACCTGCCCA GCCCCCTCGG CCCGGTGCTC TACGAGCTGG ATGGAAAGAT CAGGGACGAA
GTCTTCGAGT ACGGTTCCTT CGTCCAGAGC CGGATGTACG CGAAAGGCGT GGCCTGCAGC
GACTGCCACG ATCCGCACAG CGTACGCCCG AAAGCCGAGG GCAACGGTGT CTGCCTGCAG
TGTCACAACC CCTCCGGTCG CGCCGTTCGC CGTGGCATCG ACGCTGGCGG CCTGGCCGCC
GGCGACTACA CCTCGCGCGA ACACCTCCGC CACCGCCCCG AAGGCCCGGC CGGGCAGTGC
GTCGCCTGCC ACATGCCGGG GAAGTACTAC ATGGTCAACG ACCTGCGTCA CGACCATTCC
TTCAGCGTGC CGAACCCGGC CCGGGCCCTG GCGCTGGGTC TCTCGGACGC CTGCCTCGGC
TGCCATGCGC AGATGCCCGG GGCAACCCTG GTGGCAAGCT TCCGCGACTG GTATCCGCGC
GCACTCCCAC GCGATGGCGG CTATGCGCAG GACCTGGCAC TGGTGCGCAA CGGCCACCCC
GGCGCCGCCG CGGCCCTGCT GCGGCAACTG CGCCGCACCG ACCTGCCGGC GATCCGCCGC
GCCACGCTCC TCGGCGAGGT TCCCGGCTAT CCCGGGCAAG CCCTGCTGCA GCAGGCGCTC
GCCGACCTGG GCGACGACGA TCCGCAGGTT CGCGAGGCGG CCATCGGTGC CGTCGCCGCC
CTGCTTTCGC CAGCGGAACG AGTCGCGCGG ATCGCTCCGT CGCTGAGCGA CCCGCTGCGC
GCGGTGCGCC TGTCGGCCGC CTACGCGCTG CTCCCCGCCA TCGCCGAACT CGGCACGCAC
GCCGCGGCCT GGCGCCGAGC CATCGACGAA TACGAACAGG CCCAGCTGGC CCAGCGCGAA
CGCGCCGAGG CCAATCTCAA CCTGGCCAGC CTGTACCAGG CCGACGGCCG GCCGGGCCTG
GTACAGGCGC GCCTGCGGGA GGCCCTGCGC CGCGATGCGG ATTTCGCTCC GGCGCGGGTC
GCCCTCGGCC AGTGGCTGGA GAACGCCGGC CGCGACAGCG AAGCCATCGA GCTGTTGCAG
GACGGCATCC GCCGCCAGCC ACGCTCGGGC CTGCTGCGCT ACGCCAAGGG ACTGGCGCTG
ATCCGCCAGG GCAAGCGCGA AGCCGCACGC CAGGCGCTCG CCGAAGCGCT CGCGGCGGAA
CCGGACAACC CGCGCCATGC CTATGTCCTC GCCGTCGCCT GGCACGAGGC CGGACAACCA
GGCAAAGCCA TCGAGGTCCT ACGCGCCCTG CTCGCGCGGC GGCCGGCCGA ACGCCCGGCG
CGCCTGGCTC TGGCCGGCTA CCTGCGGCAA GCCGGCGATA TCGCCGGGGC CGAAACGGCG
CTGGCCGAAC TGCGGGCGAT CAACCCCGAC GATCCGCTGT TCCGCTAG
 
Protein sequence
MRMPFVPDRR DAHPPLPRRR ASYCAGLLWS AALAWSPAIA AGATAGLVDE GTCQACHARQ 
SEQWRGSHHQ LAMQPASPGS VLGDFSDVRF SHAGETTRFY RKGDAYWVNT PGADGSNADF
QVRYTFGVEP LQQYLLDTGG GQLQALGVAW DTRRKAWFHL YPDERVDARH PLHWSKPQQN
ANFMCMECHN TGFERNHDAA SGRFDSQWLA TGVGCQSCHG PAAAHLAWTR QPDRRQAHAG
FAGSLAATAN RAQVESCARC HSRRSPLGDG FDATARLLDD YLPSPLGPVL YELDGKIRDE
VFEYGSFVQS RMYAKGVACS DCHDPHSVRP KAEGNGVCLQ CHNPSGRAVR RGIDAGGLAA
GDYTSREHLR HRPEGPAGQC VACHMPGKYY MVNDLRHDHS FSVPNPARAL ALGLSDACLG
CHAQMPGATL VASFRDWYPR ALPRDGGYAQ DLALVRNGHP GAAAALLRQL RRTDLPAIRR
ATLLGEVPGY PGQALLQQAL ADLGDDDPQV REAAIGAVAA LLSPAERVAR IAPSLSDPLR
AVRLSAAYAL LPAIAELGTH AAAWRRAIDE YEQAQLAQRE RAEANLNLAS LYQADGRPGL
VQARLREALR RDADFAPARV ALGQWLENAG RDSEAIELLQ DGIRRQPRSG LLRYAKGLAL
IRQGKREAAR QALAEALAAE PDNPRHAYVL AVAWHEAGQP GKAIEVLRAL LARRPAERPA
RLALAGYLRQ AGDIAGAETA LAELRAINPD DPLFR