| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3904 |
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| Symbol | |
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| ID | 5358984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 4040801 |
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| End bp | 4043068 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640812954 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_001349258 |
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| Protein GI | 152985242 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.041716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGC CCTTCGTGCC CGACCGGCGA GACGCCCACC CACCCCTTCC CCGCCGCCGC
GCCAGCTACT GCGCGGGCCT GCTCTGGAGC GCGGCGCTGG CGTGGTCCCC AGCGATCGCG
GCCGGCGCGA CCGCCGGCCT GGTCGACGAA GGCACCTGCC AGGCCTGCCA CGCCCGGCAG
AGCGAACAGT GGCGCGGCTC GCACCACCAG TTGGCGATGC AGCCGGCCAG CCCCGGGAGC
GTCCTCGGCG ACTTCTCCGA CGTGCGTTTC AGCCACGCCG GGGAAACCAC CCGCTTCTAC
CGCAAGGGTG ACGCGTACTG GGTGAATACG CCCGGCGCCG ACGGCAGCAA CGCCGACTTC
CAGGTGCGCT ACACCTTCGG CGTGGAGCCG CTCCAGCAAT ATCTGCTGGA CACCGGCGGC
GGACAACTGC AAGCCCTGGG CGTGGCCTGG GATACCCGAC GCAAGGCCTG GTTCCACCTG
TACCCGGACG AACGCGTGGA TGCCCGCCAT CCGCTGCACT GGAGCAAGCC ACAGCAGAAC
GCCAACTTCA TGTGCATGGA GTGCCACAAC ACCGGTTTCG AACGCAATCA CGACGCCGCC
AGCGGCCGCT TCGACAGCCA GTGGCTGGCT ACCGGCGTCG GTTGCCAGAG TTGCCACGGT
CCGGCCGCCG CGCACCTGGC CTGGACCCGC CAGCCCGATC GGAGGCAGGC GCACGCCGGC
TTCGCCGGGA GCCTGGCGGC CACCGCCAAC CGCGCCCAGG TGGAAAGCTG TGCGCGCTGC
CATTCGCGGC GCTCGCCGCT AGGCGACGGC TTCGATGCGA CGGCGCGCCT GCTCGACGAC
TACCTGCCCA GCCCCCTCGG CCCGGTGCTC TACGAGCTGG ATGGAAAGAT CAGGGACGAA
GTCTTCGAGT ACGGTTCCTT CGTCCAGAGC CGGATGTACG CGAAAGGCGT GGCCTGCAGC
GACTGCCACG ATCCGCACAG CGTACGCCCG AAAGCCGAGG GCAACGGTGT CTGCCTGCAG
TGTCACAACC CCTCCGGTCG CGCCGTTCGC CGTGGCATCG ACGCTGGCGG CCTGGCCGCC
GGCGACTACA CCTCGCGCGA ACACCTCCGC CACCGCCCCG AAGGCCCGGC CGGGCAGTGC
GTCGCCTGCC ACATGCCGGG GAAGTACTAC ATGGTCAACG ACCTGCGTCA CGACCATTCC
TTCAGCGTGC CGAACCCGGC CCGGGCCCTG GCGCTGGGTC TCTCGGACGC CTGCCTCGGC
TGCCATGCGC AGATGCCCGG GGCAACCCTG GTGGCAAGCT TCCGCGACTG GTATCCGCGC
GCACTCCCAC GCGATGGCGG CTATGCGCAG GACCTGGCAC TGGTGCGCAA CGGCCACCCC
GGCGCCGCCG CGGCCCTGCT GCGGCAACTG CGCCGCACCG ACCTGCCGGC GATCCGCCGC
GCCACGCTCC TCGGCGAGGT TCCCGGCTAT CCCGGGCAAG CCCTGCTGCA GCAGGCGCTC
GCCGACCTGG GCGACGACGA TCCGCAGGTT CGCGAGGCGG CCATCGGTGC CGTCGCCGCC
CTGCTTTCGC CAGCGGAACG AGTCGCGCGG ATCGCTCCGT CGCTGAGCGA CCCGCTGCGC
GCGGTGCGCC TGTCGGCCGC CTACGCGCTG CTCCCCGCCA TCGCCGAACT CGGCACGCAC
GCCGCGGCCT GGCGCCGAGC CATCGACGAA TACGAACAGG CCCAGCTGGC CCAGCGCGAA
CGCGCCGAGG CCAATCTCAA CCTGGCCAGC CTGTACCAGG CCGACGGCCG GCCGGGCCTG
GTACAGGCGC GCCTGCGGGA GGCCCTGCGC CGCGATGCGG ATTTCGCTCC GGCGCGGGTC
GCCCTCGGCC AGTGGCTGGA GAACGCCGGC CGCGACAGCG AAGCCATCGA GCTGTTGCAG
GACGGCATCC GCCGCCAGCC ACGCTCGGGC CTGCTGCGCT ACGCCAAGGG ACTGGCGCTG
ATCCGCCAGG GCAAGCGCGA AGCCGCACGC CAGGCGCTCG CCGAAGCGCT CGCGGCGGAA
CCGGACAACC CGCGCCATGC CTATGTCCTC GCCGTCGCCT GGCACGAGGC CGGACAACCA
GGCAAAGCCA TCGAGGTCCT ACGCGCCCTG CTCGCGCGGC GGCCGGCCGA ACGCCCGGCG
CGCCTGGCTC TGGCCGGCTA CCTGCGGCAA GCCGGCGATA TCGCCGGGGC CGAAACGGCG
CTGGCCGAAC TGCGGGCGAT CAACCCCGAC GATCCGCTGT TCCGCTAG
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| Protein sequence | MRMPFVPDRR DAHPPLPRRR ASYCAGLLWS AALAWSPAIA AGATAGLVDE GTCQACHARQ
SEQWRGSHHQ LAMQPASPGS VLGDFSDVRF SHAGETTRFY RKGDAYWVNT PGADGSNADF
QVRYTFGVEP LQQYLLDTGG GQLQALGVAW DTRRKAWFHL YPDERVDARH PLHWSKPQQN
ANFMCMECHN TGFERNHDAA SGRFDSQWLA TGVGCQSCHG PAAAHLAWTR QPDRRQAHAG
FAGSLAATAN RAQVESCARC HSRRSPLGDG FDATARLLDD YLPSPLGPVL YELDGKIRDE
VFEYGSFVQS RMYAKGVACS DCHDPHSVRP KAEGNGVCLQ CHNPSGRAVR RGIDAGGLAA
GDYTSREHLR HRPEGPAGQC VACHMPGKYY MVNDLRHDHS FSVPNPARAL ALGLSDACLG
CHAQMPGATL VASFRDWYPR ALPRDGGYAQ DLALVRNGHP GAAAALLRQL RRTDLPAIRR
ATLLGEVPGY PGQALLQQAL ADLGDDDPQV REAAIGAVAA LLSPAERVAR IAPSLSDPLR
AVRLSAAYAL LPAIAELGTH AAAWRRAIDE YEQAQLAQRE RAEANLNLAS LYQADGRPGL
VQARLREALR RDADFAPARV ALGQWLENAG RDSEAIELLQ DGIRRQPRSG LLRYAKGLAL
IRQGKREAAR QALAEALAAE PDNPRHAYVL AVAWHEAGQP GKAIEVLRAL LARRPAERPA
RLALAGYLRQ AGDIAGAETA LAELRAINPD DPLFR
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