| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3898 |
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| Symbol | lasR |
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| ID | 5358388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4032701 |
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| End bp | 4033420 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640812949 |
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| Product | transcriptional regulator LasR |
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| Protein accession | YP_001349253 |
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| Protein GI | 152989200 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.219668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTGG TTGACGGTTT TCTTGAGCTG GAACGCTCAA GTGGGAAATT GGAATGGAGC
GCCATCCTGC AGAAGATGGC GAGCGACCTG GGGTTTTCGA AAATCCTGTT CGGCCTGCTA
CCGAAGGACA GCCAGGACTA CGAGAACGCC TTCATCGTCG GCAACTACCC GGCCGCCTGG
CGCGAGCATT ACGACAAGGC CGGCTATGCG CGGGTCGACC CGACGGTCAG CCATTGTACC
CAGAGCGTCC TGCCGATCTT CTGGGAACCC TCCATCTACC AGACACGCAA GCAGCACGAG
TTCTTCGAGG AAGCCTCGGC CGCCGGCCTG GTGTACGGGC TGACCATGCC GTTGCACGGT
GCGCGCGGCG AACTCGGCGC CCTGAGTCTG AGCGTGGAGG CGGAGAGCCG GGCCGAGGCG
AATCGCTTCA TGGAGTCGGT GCTGCCGACC CTTTGGATGC TCAAGGACTA CGCACTGCAA
AGCGGCGCCG GACTGGCCTT CGAACATCCG GTGAACAAGC CGGTGGTATT GACCAGCCGG
GAGAAGGAAG TCCTGCAGTG GTGCGCCATC GGCAAGACCA GTTGGGAGAT ATCGGTCATC
TGCAACTGCT CGGAAGCCAA CGTGAATTTC CATATGGGAA ATATCCGGCG GAAGTTTGGT
GTCACCTCCC GCCGTGTGGC TGCCATTATG GCTGTTAATT TGGGTCTTAT TACTCTCTGA
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| Protein sequence | MALVDGFLEL ERSSGKLEWS AILQKMASDL GFSKILFGLL PKDSQDYENA FIVGNYPAAW
REHYDKAGYA RVDPTVSHCT QSVLPIFWEP SIYQTRKQHE FFEEASAAGL VYGLTMPLHG
ARGELGALSL SVEAESRAEA NRFMESVLPT LWMLKDYALQ SGAGLAFEHP VNKPVVLTSR
EKEVLQWCAI GKTSWEISVI CNCSEANVNF HMGNIRRKFG VTSRRVAAIM AVNLGLITL
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