Gene PSPA7_3896 details

Gene Information

• Locus tag: PSPA7_3896
• ID: 5358016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 4029673
• End bp: 4031625
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640812946
• Product: hypothetical protein
• Protein accession: YP_001349250
• Protein GI: 152985255
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.165202
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACTGC TCAAGCAATT GTTCCTCGCC ATCTGCCTGT TCCTCGTGGT CGCCTTCAGC 
GGCAGCTTCG TCAGCAGCGT GGAGAACTCC CGCGAGCAGT TGCGCGGCCA GTTGCGCTCC 
CACGCGCAGG ACGCCGCCAC CGCCCTCGGC CTGTCGCTGA CGCCGCACGT GGACGACCCG 
GCGATGGTGC AACTGATGGT CAGCTCGATC TTCGACAGCG GTTACTTCGC CAGCATCCGG 
GTGATCGACA TCCGGAGCGG CAAACCGCTG GTCGAGCGCG TGCAGGCACA TGCCGAGCGC 
ACGGTGCCAG GCTGGTTCGC GCGCCTGGTG GATATCCAGG CGCAAGGTGG CGACGCGCTG 
ATCATGCGCG GCTGGGAACA GGCGGCGCGG GTCGAGGTGG TCAGCCACCC GCAGTTCGCC 
CTGGCGCGCC TGTGGGACAG CGCCCTGGGC AGTCTCTACT GGCTGCTGGC CTGTGGCGCG 
ATCAGCCTGC TGCTCGGTGG CTGGCTGCTG CGTCGCCAGC TGCGCCCGCT CGACCAGATG 
GTGTTCCAGG CCCATGCGAT CAGCCGGCGG GAGTTCCTCA GCCTGCCGAA GCTGCCACGC 
ACGCCGGAAC TGCGCCGGGT CGTACAGGCG ATGAACCAGA TGGTGGAGAA GCTCCGTGCG 
CTGTTCGCCG AAGAAGCCGC GCGCAGCGAG AAGCTGCGTG CCCAGGCCTA CCAGGACAGC 
CTTACCGGCC TGCCCAACCG GCGCCTGTTC GACGCGCGCC TCAACGAACA GCTCGGCACC 
GGCGAGCACG CGCATGCCGG CCAGTTGCTG GTGGTGCGCC TGAACGACCT GAACGGCCTC 
AACCAGCGGC TCGGCGGGCA ACGCACCGAC GCCCTGATCC AGGCGGTGGC CGGGTCGCTG 
GCCGAGGCCT GTCGCCAGCA TGGCCGCGCC GACTGGCTGC TGGCCCGCAG CCGCGGCGGG 
GAATTCGCCC TGCTCGCCCC CGGTTGCTCC CGCGAACAGG CCGAGCAACT GGCCGGCGAA 
CTCTGCGCGG ACCTGGAGAA CCTCGCCCTC ACCGGTGCCA GCGACCGCTC GCCGGTCGCC 
CACCTCGGCA TCAGCGCGTT CGCCGAAGGC GACTCGGCGG CGGACGTCCT GGCCCGCGCC 
GACCAGGCCC TGGCCCAGGC CGAAAGCCAG CCCGGCCAGC CCTGGGCAAG CCAGGACGGC 
AGTGCGCGCG CGGCGCTCAA CGACAGCCAG GACTGGCACG ACTGGATCGA CCTGGCGCTG 
GCCGAACGCC GGCTGCTGCT CCACTTCCAG CCGGTGGTGG AATGCCTCGA TACCCAGCGC 
ATCCTCCATC ACAAAGTCCT GGCGCGTTTG CTCGCCCCTC AAGGCGAAGC CATCGCCGCC 
GGACGCTTCC TGCCCTGGAT CGAGCGCTTC GGCTGGGCGT CGCGGCTCGA CCTGGCGATG 
CTCGGACAGA GCCTGGAACA CTTGCAGCGG CATCCGCACC CGCTGGCGCT CAGCCTGTCG 
GCCAGCAGCG TGCGCAACGC CCAGGCGTTC GCCCCGCTGC TGGCGCTGCT CGAGGCGCAC 
CCGCAACAGG CGCGCCTGCT GACCCTGGAA CTGGACGAGC GGCACCTGCC GCCGGCGGCC 
GAGCTGGAAC GCCTGAGCCA GGCCCTGCGC GAGGTCGGTT GCGGCCTTGG CCTGCAGCAT 
TTCGGTGGGC GTTTCAGCCT GATCGGCAAC CTCACCCACC TGGGGCTGGC CTATCTGAAA 
CTGGACGGCT GCTATCTGCG TGCCGTCGAT CGGGAAAGCG ACAAGCGCCT GTTCATCGAG 
GCGGTATATC GCACCACCCA CAGCATCGAC CTGCCGCTGA TCGCGGAGCA GGTGGAAACC 
CCCGGTGAAC TCGAGGTGCT GCGGGAAATG GGCTTGCGTG GCGCCATGGG ACGCCTGTTC 
GGTAGCCCGG CACCCTGGTC CGGGGATACC TGA 

 

Protein sequence

MSLLKQLFLA ICLFLVVAFS GSFVSSVENS REQLRGQLRS HAQDAATALG LSLTPHVDDP 
AMVQLMVSSI FDSGYFASIR VIDIRSGKPL VERVQAHAER TVPGWFARLV DIQAQGGDAL 
IMRGWEQAAR VEVVSHPQFA LARLWDSALG SLYWLLACGA ISLLLGGWLL RRQLRPLDQM 
VFQAHAISRR EFLSLPKLPR TPELRRVVQA MNQMVEKLRA LFAEEAARSE KLRAQAYQDS 
LTGLPNRRLF DARLNEQLGT GEHAHAGQLL VVRLNDLNGL NQRLGGQRTD ALIQAVAGSL 
AEACRQHGRA DWLLARSRGG EFALLAPGCS REQAEQLAGE LCADLENLAL TGASDRSPVA 
HLGISAFAEG DSAADVLARA DQALAQAESQ PGQPWASQDG SARAALNDSQ DWHDWIDLAL 
AERRLLLHFQ PVVECLDTQR ILHHKVLARL LAPQGEAIAA GRFLPWIERF GWASRLDLAM 
LGQSLEHLQR HPHPLALSLS ASSVRNAQAF APLLALLEAH PQQARLLTLE LDERHLPPAA 
ELERLSQALR EVGCGLGLQH FGGRFSLIGN LTHLGLAYLK LDGCYLRAVD RESDKRLFIE 
AVYRTTHSID LPLIAEQVET PGELEVLREM GLRGAMGRLF GSPAPWSGDT